Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.1e-78 296.6 146 100.0
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 9.4e-27 124.0 61 96.7
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.4e-22 110.2 62 79.0
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.4e-22 109.4 61 82.0
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.4e-22 109.4 61 80.3
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.1e-22 109.0 61 80.3
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 3.1e-22 109.0 61 80.3
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 3.1e-22 109.0 61 78.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 4.1e-22 108.6 61 77.0
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 5.3e-22 108.2 61 77.0
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 7.0e-22 107.8 61 78.7
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 9.1e-22 107.5 61 78.7
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.2e-21 107.1 61 78.7
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.2e-21 107.1 61 78.7
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.2e-21 107.1 61 77.0
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.2e-21 107.1 61 77.0
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.5e-21 106.7 61 80.3
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.5e-21 106.7 61 78.7
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.5e-21 106.7 61 77.0
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.6e-21 105.9 61 77.0
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 3.4e-21 105.5 61 75.4
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 3.4e-21 105.5 61 77.0
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 3.4e-21 105.5 61 75.4
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.5e-21 105.1 61 73.8
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 4.5e-21 105.1 61 75.4
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 4.5e-21 105.1 61 77.0
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 5.9e-21 104.8 61 75.4
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.9e-21 104.8 62 72.6
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 5.9e-21 104.8 61 75.4
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 5.9e-21 104.8 61 75.4
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 5.9e-21 104.8 61 75.4
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 7.7e-21 104.4 61 73.8
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 7.7e-21 104.4 61 73.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.7e-21 104.4 61 77.0
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.0e-20 104.0 61 75.4
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.0e-20 104.0 61 75.4
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.0e-20 104.0 61 75.4
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.3e-20 103.6 61 73.8
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-20 103.6 61 75.4
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 1.3e-20 103.6 61 73.8
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 1.7e-20 103.2 61 72.1
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.7e-20 103.2 61 75.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 2.2e-20 102.8 61 73.8
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.2e-20 102.8 61 72.1
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.2e-20 102.8 61 73.8
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 2.2e-20 102.8 61 73.8
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 73.8
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 73.8
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 73.8
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 73.8
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 72.1
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.9e-20 102.4 61 73.8
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.0e-20 101.7 61 72.1
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.0e-20 101.7 61 73.8
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 5.0e-20 101.7 61 73.8
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.5e-20 101.3 61 72.1
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 6.5e-20 101.3 61 72.1
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 8.5e-20 100.9 61 72.1
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.1e-19 100.5 61 72.1
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.1e-19 100.5 61 72.1
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.1e-19 100.5 61 73.8
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.4e-19 100.1 61 73.8
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.4e-19 100.1 61 72.1
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.4e-19 100.1 61 70.5
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.4e-19 100.1 61 72.1
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.9e-19 99.8 61 68.9
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 1.9e-19 99.8 61 73.8
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 70.5
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 72.1
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.5e-19 99.4 61 72.1
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 3.2e-19 99.0 62 67.7
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.2e-19 99.0 61 72.1
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 3.2e-19 99.0 61 72.1
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 3.2e-19 99.0 61 73.8
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.2e-19 99.0 61 70.5
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 4.2e-19 98.6 61 72.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 4.2e-19 98.6 61 73.8
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 5.5e-19 98.2 61 68.9
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.2e-19 97.8 61 68.9
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 7.2e-19 97.8 61 68.9
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 7.2e-19 97.8 61 68.9
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 9.4e-19 97.4 61 70.5
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 9.4e-19 97.4 61 67.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 9.4e-19 97.4 61 72.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 9.4e-19 97.4 61 70.5
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-18 97.1 61 67.2
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.2e-18 97.1 61 70.5
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.6e-18 96.7 61 67.2
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.6e-18 96.7 61 67.2
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.6e-18 96.7 61 70.5
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.6e-18 96.7 61 70.5
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 2.7e-18 95.9 61 67.2
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.6e-18 95.5 61 65.6
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.6e-18 95.5 61 67.2
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 4.7e-18 95.1 61 67.2
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 6.1e-18 94.7 55 80.0
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 6.1e-18 94.7 61 67.2
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.0e-17 94.0 61 67.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.4e-17 93.6 61 68.9
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.9e-17 92.0 61 65.6
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 3.9e-17 92.0 61 65.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 6.7e-17 91.3 61 67.2
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 6.7e-17 91.3 61 65.6
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 6.7e-17 91.3 55 74.5
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.5e-16 90.1 61 63.9
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 3.7e-15 85.5 61 60.7
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 8.2e-15 84.3 61 62.3
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.4e-14 83.6 61 57.4
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.5e-13 79.0 57 59.6
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 4.5e-13 78.6 57 61.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.9e-12 75.9 61 50.8
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 8.5e-12 74.3 49 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.2e-11 72.4 59 52.5
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 7.2e-11 71.2 42 76.2
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.2e-10 70.5 49 65.3
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.6e-10 68.9 42 73.8
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 8.0e-10 67.8 61 49.2
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.4e-09 67.0 59 47.5
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.0e-09 65.9 42 64.3
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 8.8e-09 64.3 60 51.7
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.5e-08 63.5 39 66.7


User provided reference genes

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