Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4165G54433 Striga asiatica HOM05D017085 ORTHO05D026193 3.7e-129 464.9 242 100.0
SGA_v2.0_scaffold79G25509 Striga asiatica HOM05D017085 ORTHO05D026193 3.9e-102 375.2 198 99.5
SGA_v2.0_scaffold8G04316 Striga asiatica HOM05D017085 ORTHO05D026193 3.4e-66 255.8 228 68.0
SGA_v2.0_scaffold166G38396 Striga asiatica HOM05D017085 ORTHO05D026193 6.5e-65 251.5 193 78.8
SGA_v2.0_scaffold79G25514 Striga asiatica HOM05D017085 ORTHO05D000006 8.8e-30 134.8 80 92.5
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 4.1e-27 125.9 118 61.0
SGA_v2.0_scaffold154G37136 Striga asiatica HOM05D017085 ORTHO05D000006 5.0e-25 119.0 78 85.9
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.4e-11 72.4 132 37.9
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.0e-11 72.0 141 34.0
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 3.5e-10 69.7 141 35.5
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-09 67.4 152 33.6
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 1.5e-08 64.3 82 32.9
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 5.6e-08 62.4 116 37.1
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.6e-08 62.4 120 31.7
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 9.5e-08 61.6 142 32.4
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.2e-07 61.2 128 34.4
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.2e-07 61.2 128 34.4
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-07 60.5 148 31.8
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 2.1e-07 60.5 131 33.6
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.6e-07 59.7 142 34.5
Dinv22429 Davidia involucrata HOM05D022575 ORTHO05D020547 4.7e-07 59.3 98 31.6
Dinv24732 Davidia involucrata HOM05D003557 ORTHO05D001267 4.7e-07 59.3 84 40.5
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.7e-07 59.3 85 36.5
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 6.1e-07 58.9 140 30.0
Hma1.2p1_0074F.1_g039110 Hydrangea macrophylla HOM05D000030 ORTHO05D007344 8.0e-07 58.5 62 41.9
Rhsim01G0169500 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.0e-07 58.5 144 30.6
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.0e-06 58.2 127 32.3
Gohir.D01G106966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.4e-06 57.8 55 47.3
Gorai.002G131300 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.4e-06 57.8 55 47.3
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.8e-06 57.4 127 33.9
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 5.2e-06 55.8 126 31.7
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 6.8e-06 55.5 126 34.1


User provided reference genes

Program Settings