Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold413G51163 Striga asiatica HOM05D010444 ORTHO05D051413 1.9e-170 602.4 305 100.0
Zm00001eb280960 Zea mays HOM05D010444 ORTHO05D051413 6.1e-20 102.4 138 50.7
Migut.J01735 Erythranthe guttata HOM05D015573 ORTHO05D010602 8.0e-12 75.5 165 37.0
SGA_v2.0_scaffold32G13151 Striga asiatica HOM05D000068 ORTHO05D008806 4.0e-11 73.2 177 37.3
SGA_v2.0_scaffold127G34043 Striga asiatica HOM05D011891 ORTHO05D014146 3.1e-08 63.5 188 33.5
Os02g0578201 Oryza sativa ssp. japonica HOM05D011587 ORTHO05D010602 7.0e-08 62.4 167 38.3
CiPaw.05G034500 Carya illinoinensis HOM05D011587 ORTHO05D010602 2.0e-07 60.8 127 40.9
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 2.0e-07 60.8 173 35.3
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.7e-07 60.5 90 43.3
SGA_v2.0_scaffold12G06190 Striga asiatica HOM05D011891 ORTHO05D014146 7.7e-07 58.9 130 40.8
Os09g0518266 Oryza sativa ssp. japonica HOM05D011891 ORTHO05D014146 1.7e-06 57.8 161 36.0
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 1.7e-06 57.8 132 38.6
HanXRQChr03g0091821 Helianthus annuus HOM05D010444 ORTHO05D010602 8.6e-06 55.5 60 48.3


User provided reference genes

Program Settings