Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.1e-75 285.8 163 100.0
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.4e-68 263.1 154 98.1
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 2.9e-53 212.2 154 77.3
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.6e-49 199.1 138 79.7
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.3e-48 196.8 139 77.0
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 2.8e-48 195.7 142 77.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 3.7e-48 195.3 152 73.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 4.8e-48 194.9 149 73.2
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.1e-47 193.7 146 71.9
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.4e-47 192.6 151 72.2
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 3.1e-47 192.2 142 76.8
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 3.1e-47 192.2 139 75.5
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 7.0e-47 191.0 133 76.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 9.1e-47 190.7 151 70.9
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.2e-46 190.3 128 80.5
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.6e-46 189.1 151 72.2
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.0e-45 187.2 142 73.2
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 5.0e-45 184.9 144 72.2
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 5.0e-45 184.9 144 72.2
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 6.5e-45 184.5 130 76.2
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.9e-44 183.0 151 70.2
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 4.2e-44 181.8 148 68.2
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 5.5e-44 181.4 151 66.9
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 5.5e-44 181.4 148 69.6
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.5e-44 181.4 130 77.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 5.5e-44 181.4 130 73.1
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 7.2e-44 181.0 150 66.0
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.2e-43 180.3 146 69.9
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.1e-43 179.5 146 69.2
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.6e-43 178.7 147 70.1
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 6.1e-43 177.9 142 66.9
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.4e-42 176.8 123 77.2
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.8e-42 176.4 129 72.9
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 2.3e-42 176.0 138 67.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.0e-42 175.3 132 71.2
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.0e-42 175.3 132 71.2
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.2e-42 174.9 151 64.2
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 5.2e-42 174.9 147 66.0
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 8.8e-42 174.1 148 66.9
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.2e-41 173.7 151 64.9
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.2e-41 173.7 147 66.0
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.5e-41 173.3 147 64.6
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.0e-41 172.9 123 78.9
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.6e-41 172.6 142 66.9
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 3.4e-41 172.2 136 69.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 5.7e-41 171.4 126 71.4
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 5.7e-41 171.4 137 68.6
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 5.7e-41 171.4 147 65.3
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 7.5e-41 171.0 142 67.6
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 9.7e-41 170.6 147 63.3
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.3e-40 170.2 140 65.7
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.7e-40 169.9 152 64.5
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.2e-40 169.5 150 61.3
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 2.8e-40 169.1 142 66.2
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 8.3e-40 167.5 133 66.9
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 8.3e-40 167.5 140 65.7
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.1e-39 167.2 125 71.2
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 1.1e-39 167.2 140 65.7
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.8e-39 166.4 109 79.8
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 2.4e-39 166.0 143 63.6
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 3.1e-39 165.6 134 67.9
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.1e-39 165.2 140 65.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 9.1e-39 164.1 121 73.6
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.6e-38 163.3 143 63.6
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.0e-38 162.9 141 68.1
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 2.0e-38 162.9 148 60.1
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.0e-38 162.9 140 62.1
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 2.7e-38 162.5 142 65.5
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 5.9e-38 161.4 143 62.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.0e-37 160.6 151 60.9
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.0e-37 160.6 151 60.9
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.3e-37 160.2 146 59.6
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.3e-37 160.2 137 65.0
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.7e-37 159.8 143 62.2
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.7e-37 159.8 143 62.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.7e-37 159.8 157 59.9
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.9e-37 159.1 113 73.5
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 8.5e-37 157.5 144 62.5
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 3.2e-36 155.6 136 61.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 7.2e-36 154.5 153 55.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 9.4e-36 154.1 129 62.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.6e-35 153.3 137 63.5
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 2.1e-35 152.9 125 68.8
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.7e-35 152.5 137 61.3
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 2.7e-35 152.5 145 60.7
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 3.6e-35 152.1 142 61.3
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.7e-35 151.8 131 64.1
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 8.0e-35 151.0 137 60.6
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 8.0e-35 151.0 137 62.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 8.0e-35 151.0 137 60.6
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 8.0e-35 151.0 146 55.5
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 8.0e-35 151.0 137 61.3
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.0e-34 150.6 137 59.9
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.0e-34 150.6 137 59.9
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.4e-34 150.2 137 60.6
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.4e-34 150.2 131 61.8
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.4e-34 150.2 153 56.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.3e-34 149.4 166 54.2
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 5.2e-34 148.3 139 56.1
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.2e-33 147.1 140 57.9
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 4.4e-33 145.2 212 46.2
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 9.8e-33 144.1 144 58.3
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-32 143.7 174 51.1
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 8.3e-32 141.0 131 60.3
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.4e-31 140.2 137 59.1
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.8e-31 139.8 141 57.4
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 4.1e-31 138.7 131 58.0
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 3.5e-30 135.6 126 61.9
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.5e-30 135.6 157 53.5
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 5.9e-30 134.8 131 57.3
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.3e-29 133.7 140 55.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.7e-29 133.3 113 66.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 2.1e-27 126.3 107 63.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.5e-25 120.2 99 66.7
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.5e-25 120.2 310 32.9
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.7e-24 115.5 142 53.5
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 5.6e-20 101.7 70 74.3
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.2e-19 100.5 101 58.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 2.6e-17 92.8 70 67.1
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 7.5e-17 91.3 150 38.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.9e-15 86.7 137 42.3
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.2e-15 84.3 135 42.2
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.0e-13 78.6 142 41.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.2e-11 73.9 75 60.0
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 8.9e-10 67.8 54 68.5
SGA_v2.0_scaffold74G24651 Striga asiatica HOM05D006148 ORTHO05D399151 8.3e-08 61.2 52 71.2


User provided reference genes

Program Settings