Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15636 Striga asiatica HOM05D015389 ORTHO05D000394 8.8e-73 276.9 148 100.0
Migut.L00943 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.0e-33 147.1 144 52.8
Migut.K01187 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.5e-32 143.3 144 52.8
Migut.O00422 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.1e-25 120.6 144 47.9
Migut.L00939 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.2e-24 117.1 144 47.2
Migut.O00489 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.5e-24 116.7 144 46.5
Migut.L00950 Erythranthe guttata HOM05D015389 ORTHO05D000394 3.4e-24 115.5 144 47.2
Oeu019137.1 Olea europaea HOM05D000748 ORTHO05D000394 6.4e-23 111.3 125 42.4
SalBow1G7555 Salvia bowleyana HOM05D015389 ORTHO05D000394 1.4e-17 93.6 124 46.0
Oeu052534.1 Olea europaea HOM05D000748 ORTHO05D000394 1.2e-16 90.5 122 37.7
Migut.L00951 Erythranthe guttata HOM05D015389 ORTHO05D000394 2.9e-15 85.9 79 54.4
FAN21G1875 Fragaria x ananassa HOM05D000748 ORTHO05D000394 1.4e-14 83.6 148 33.8
FAN16G1836 Fragaria x ananassa HOM05D000748 ORTHO05D000394 5.4e-14 81.6 150 34.0
FvH4_3g09260 Fragaria vesca HOM05D000748 ORTHO05D000394 9.2e-14 80.9 148 32.4
RcHm_v2.0_Chr5g0008311 Rosa chinensis HOM05D000748 ORTHO05D000394 6.0e-13 78.2 148 31.8
FAN11G2697 Fragaria x ananassa HOM05D000748 ORTHO05D000394 1.7e-12 76.6 132 31.8
Sabra13G0111200 Salix brachista HOM05D000748 ORTHO05D000394 3.9e-12 75.5 149 34.9
MD17G1240500 Malus domestica HOM05D000748 ORTHO05D000394 8.6e-12 74.3 144 32.6
AL6G49360 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 1.1e-11 73.9 146 34.9
AT4G03540 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 1.1e-11 73.9 146 34.2
Carub.0006s3353 Capsella rubella HOM05D000748 ORTHO05D000394 1.1e-11 73.9 146 33.6
MD09G1247600 Malus domestica HOM05D000748 ORTHO05D000394 1.1e-11 73.9 144 32.6
BcaB01g01904 Brassica carinata HOM05D000748 ORTHO05D000394 1.5e-11 73.6 146 34.9
Manes.12G089370 Manihot esculenta HOM05D000748 ORTHO05D000394 1.5e-11 73.6 151 34.4
A09p02820 Brassica napus HOM05D000748 ORTHO05D000394 2.5e-11 72.8 146 34.2
BraA09t35923Z Brassica rapa HOM05D000748 ORTHO05D000394 2.5e-11 72.8 146 34.2
Dinv23641 Davidia involucrata HOM05D000748 ORTHO05D000394 2.5e-11 72.8 149 32.9
Dinv26417 Davidia involucrata HOM05D000748 ORTHO05D000394 2.5e-11 72.8 131 35.1
Prupe.3G137700 Prunus persica HOM05D000748 ORTHO05D000394 2.5e-11 72.8 149 32.2
Aa31LG5G2920 Aethionema arabicum HOM05D000748 ORTHO05D000394 3.3e-11 72.4 146 34.9
C09p02900 Brassica napus HOM05D000748 ORTHO05D000394 3.3e-11 72.4 146 34.2
BolC9t53215H Brassica oleracea HOM05D000748 ORTHO05D000394 3.3e-11 72.4 146 34.2
Sabra19G0110700 Salix brachista HOM05D000748 ORTHO05D000394 3.3e-11 72.4 150 32.7
Sabra19G0112100 Salix brachista HOM05D000748 ORTHO05D000394 3.3e-11 72.4 150 32.7
CARHR251970 Cardamine hirsuta HOM05D000748 ORTHO05D000394 4.3e-11 72.0 146 33.6
CiPaw.03G177000 Carya illinoinensis HOM05D000748 ORTHO05D000394 4.3e-11 72.0 150 35.3
Thhalv10029027m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 4.3e-11 72.0 146 34.2
MD05G1313000 Malus domestica HOM05D000748 ORTHO05D000394 4.3e-11 72.0 147 32.7
Potri.013G131700 Populus trichocarpa HOM05D000748 ORTHO05D000394 5.6e-11 71.6 149 32.9
Medtr0004s0210 Medicago truncatula HOM05D000748 ORTHO05D000394 7.3e-11 71.2 141 32.6
Solyc08g048315.1 Solanum lycopersicum HOM05D000748 ORTHO05D000394 7.3e-11 71.2 93 39.8
Psat7g189720 Pisum sativum HOM05D000748 ORTHO05D000394 9.5e-11 70.9 150 32.7
Atru.chr10.1886 Acer truncatum HOM05D000748 ORTHO05D000394 1.2e-10 70.5 149 34.2
Sp6g03550 Schrenkiella parvula HOM05D000748 ORTHO05D000394 1.2e-10 70.5 146 34.2
Sc12g0003060 Simmondsia chinensis HOM05D000748 ORTHO05D000394 1.2e-10 70.5 149 35.6
TAR629G2208 Trochodendron aralioides HOM05D000748 ORTHO05D000394 1.2e-10 70.5 150 32.0
Potri.019G100300 Populus trichocarpa HOM05D000748 ORTHO05D000394 1.6e-10 70.1 150 33.3
Duzib106G1717 Durio zibethinus HOM05D000748 ORTHO05D000394 2.8e-10 69.3 148 32.4
Lalb_Chr03g0029451 Lupinus albus HOM05D000748 ORTHO05D000394 2.8e-10 69.3 150 31.3
Prupe.4G046800 Prunus persica HOM05D000748 ORTHO05D000394 2.8e-10 69.3 141 31.9
MD10G1295200 Malus domestica HOM05D000748 ORTHO05D000394 4.7e-10 68.6 149 32.2
Duzib235G0591 Durio zibethinus HOM05D000748 ORTHO05D000394 8.1e-10 67.8 149 29.5
Aa31LG1G21000 Aethionema arabicum HOM05D000748 ORTHO05D000394 1.1e-09 67.4 142 35.2
THA.LOC104815961 Tarenaya hassleriana HOM05D000748 ORTHO05D000394 1.1e-09 67.4 146 30.8
AL1G13190 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 1.4e-09 67.0 141 34.0
AT1G03700 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 1.4e-09 67.0 141 34.0
Glyma.06G292900 Glycine max HOM05D000748 ORTHO05D000394 1.4e-09 67.0 139 33.8
Hma1.2p1_0785F.1_g217550 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 1.4e-09 67.0 108 35.2
TWI63G0527 Tripterygium wilfordii HOM05D000748 ORTHO05D000394 1.4e-09 67.0 147 30.6
VMungo0251G0082 Vigna mungo HOM05D000748 ORTHO05D000394 1.4e-09 67.0 150 29.3
Lj3g0007355 Lotus japonicus HOM05D000748 ORTHO05D000394 1.8e-09 66.6 150 30.0
Sc21g0002840 Simmondsia chinensis HOM05D000748 ORTHO05D000394 1.8e-09 66.6 148 31.1
Actinidia07583 Actinidia chinensis HOM05D000748 ORTHO05D000394 2.4e-09 66.2 150 32.0
arahy.Tifrunner.gnm1.ann1.UQN5NZ Arachis hypogaea HOM05D000748 ORTHO05D000394 2.4e-09 66.2 139 30.9
BcaB02g06910 Brassica carinata HOM05D000748 ORTHO05D000394 2.4e-09 66.2 141 34.0
A10p02200 Brassica napus HOM05D000748 ORTHO05D000394 2.4e-09 66.2 141 34.0
Carub.0001s0280 Capsella rubella HOM05D000748 ORTHO05D000394 2.4e-09 66.2 141 34.0
COL.COLO4_31477 Corchorus olitorius HOM05D003185 ORTHO05D009915 2.4e-09 66.2 149 29.5
Thhalv10009824m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 2.4e-09 66.2 150 32.7
Lsat_1_v5_gn_7_21240 Lactuca sativa HOM05D000748 ORTHO05D000394 2.4e-09 66.2 139 37.4
Sp1g02580 Schrenkiella parvula HOM05D000748 ORTHO05D000394 2.4e-09 66.2 141 34.8
BolC5t28984H Brassica oleracea HOM05D000748 ORTHO05D000394 3.1e-09 65.9 141 34.0
CSS0009741 Camellia sinensis var. sinensis HOM05D000748 ORTHO05D000394 3.1e-09 65.9 148 31.8
CANSAT35G1994 Cannabis sativa HOM05D000748 ORTHO05D000394 3.1e-09 65.9 149 30.9
Hund21225 Selenicereus undatus HOM05D000748 ORTHO05D000394 3.1e-09 65.9 150 32.7
TAR624G1116 Trochodendron aralioides HOM05D000748 ORTHO05D000394 3.1e-09 65.9 144 31.2
EL10Ac8g20380 Beta vulgaris HOM05D000748 ORTHO05D000394 4.0e-09 65.5 144 31.2
CARHR003030 Cardamine hirsuta HOM05D000748 ORTHO05D000394 4.0e-09 65.5 141 34.0
Cpa.g.sc34.161 Carica papaya HOM05D000748 ORTHO05D000394 4.0e-09 65.5 150 30.7
Glyma.07G196300 Glycine max HOM05D000748 ORTHO05D000394 4.0e-09 65.5 150 31.3
DCAR_028069 Daucus carota HOM05D000748 ORTHO05D000394 5.2e-09 65.1 144 32.6
Lj1A1206T66 Lonicera japonica HOM05D000748 ORTHO05D000394 5.2e-09 65.1 151 31.8
arahy.Tifrunner.gnm1.ann1.BEAG7X Arachis hypogaea HOM05D000748 ORTHO05D000394 6.8e-09 64.7 139 30.9
COL.COLO4_30183 Corchorus olitorius HOM05D000748 ORTHO05D000394 6.8e-09 64.7 148 31.8
Glyma.12G113100 Glycine max HOM05D000748 ORTHO05D000394 6.8e-09 64.7 150 32.7
QL08p038716 Quercus lobata HOM05D000748 ORTHO05D000394 6.8e-09 64.7 150 31.3
TPR.G27502 Trifolium pratense HOM05D000748 ORTHO05D000394 6.8e-09 64.7 114 34.2
CANSAT80G2769 Cannabis sativa HOM05D000748 ORTHO05D000394 8.9e-09 64.3 150 32.0
PGR142G2985 Punica granatum HOM05D000748 ORTHO05D000394 8.9e-09 64.3 144 29.9
Actinidia11035 Actinidia chinensis HOM05D000748 ORTHO05D000394 1.2e-08 63.9 148 29.7
MBI07_g12790_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 1.2e-08 63.9 108 34.3
Thecc.02G179400 Theobroma cacao HOM05D000748 ORTHO05D000394 1.2e-08 63.9 148 31.1
TPR.G24161 Trifolium pratense HOM05D000748 ORTHO05D000394 1.2e-08 63.9 93 35.5
TWI36G1695 Tripterygium wilfordii HOM05D000748 ORTHO05D000394 1.2e-08 63.9 144 29.2
ClCG07G002920 Citrullus lanatus HOM05D000748 ORTHO05D000394 1.5e-08 63.5 150 30.0
CsaV3_7G004420 Cucumis sativus L. HOM05D000748 ORTHO05D000394 1.5e-08 63.5 150 30.0
Gohir.D09G219300 Gossypium hirsutum HOM05D000748 ORTHO05D000394 1.5e-08 63.5 147 32.0
Gorai.006G240300 Gossypium raimondii HOM05D000748 ORTHO05D000394 1.5e-08 63.5 147 32.0
GSVIVG01020544001 Vitis vinifera HOM05D000748 ORTHO05D000394 1.5e-08 63.5 139 30.2
Cfa014614 Carpinus fangiana HOM05D000748 ORTHO05D000394 2.0e-08 63.2 150 32.7
Haze_13159 Corylus avellana HOM05D000748 ORTHO05D000394 2.0e-08 63.2 148 29.7
Gohir.A09G216900 Gossypium hirsutum HOM05D000748 ORTHO05D000394 2.0e-08 63.2 147 31.3
Phvul.002G234000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 2.0e-08 63.2 150 30.7
Thecc.06G188200 Theobroma cacao HOM05D000748 ORTHO05D000394 2.0e-08 63.2 149 28.2
Thecc.09G087200 Theobroma cacao HOM05D000748 ORTHO05D000394 2.0e-08 63.2 141 27.7
AUR62017014 Chenopodium quinoa HOM05D000748 ORTHO05D000394 2.6e-08 62.8 137 32.8
MELO3C018737.2 Cucumis melo HOM05D000748 ORTHO05D000394 2.6e-08 62.8 150 29.3
MBI07_g32534_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 2.6e-08 62.8 149 28.9
Sed0012708 Sechium edule HOM05D000748 ORTHO05D000394 2.6e-08 62.8 150 30.0
Manes.16G027200 Manihot esculenta HOM05D000748 ORTHO05D000394 3.4e-08 62.4 147 29.9
Peaxi162Scf00059g01920 Petunia axillaris HOM05D000748 ORTHO05D000394 4.4e-08 62.0 144 28.5
Lj4g0017866 Lotus japonicus HOM05D000748 ORTHO05D000394 7.6e-08 61.2 147 29.9
Phvul.011G114000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 7.6e-08 61.2 150 32.7
MBI07_g32647_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 9.9e-08 60.8 94 35.1
CiPaw.10G048100 Carya illinoinensis HOM05D000748 ORTHO05D000394 1.3e-07 60.5 146 30.1
vmacro12302 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 1.7e-07 60.1 150 29.3
Dinv40554 Davidia involucrata HOM05D000748 ORTHO05D000394 2.2e-07 59.7 146 28.8
PSO832G2785 Papaver somniferum HOM05D000748 ORTHO05D000394 2.2e-07 59.7 151 31.1
Rhsim02G0129000 Rhododendron simsii HOM05D000748 ORTHO05D000394 2.2e-07 59.7 151 29.8
Eucgr.K01023 Eucalyptus grandis HOM05D000748 ORTHO05D000394 2.9e-07 59.3 149 27.5
Os05g0245300 Oryza sativa ssp. japonica HOM05D000748 ORTHO05D000394 2.9e-07 59.3 99 29.3
VMungo1127G0579 Vigna mungo HOM05D000748 ORTHO05D000394 2.9e-07 59.3 150 31.3
AUR62014819 Chenopodium quinoa HOM05D000748 ORTHO05D000394 3.8e-07 58.9 105 33.3
Potri.004G043300 Populus trichocarpa HOM05D000748 ORTHO05D000394 3.8e-07 58.9 151 28.5
Sabra11G0035800 Salix brachista HOM05D000748 ORTHO05D000394 3.8e-07 58.9 151 28.5
Gorai.009G169800 Gossypium raimondii HOM05D000748 ORTHO05D000394 4.9e-07 58.5 147 27.9
Peaxi162Scf00530g00117 Petunia axillaris HOM05D000748 ORTHO05D000394 4.9e-07 58.5 148 31.1
DCAR_013008 Daucus carota HOM05D003471 ORTHO05D004079 6.4e-07 58.2 124 31.5
BraA10t42488Z Brassica rapa HOM05D000748 ORTHO05D000394 8.4e-07 57.8 152 31.6
Glyma.14G196000 Glycine max HOM05D000748 ORTHO05D000394 8.4e-07 57.8 150 29.3
Potri.011G052100 Populus trichocarpa HOM05D000748 ORTHO05D000394 8.4e-07 57.8 151 27.8
Rhsim06G0142200 Rhododendron simsii HOM05D000748 ORTHO05D000394 8.4e-07 57.8 141 29.8
Gohir.A05G161800 Gossypium hirsutum HOM05D000748 ORTHO05D000394 1.1e-06 57.4 147 27.9
Hma1.2p1_0126F.1_g059420 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 1.4e-06 57.0 142 28.9
PGR004G1146 Punica granatum HOM05D000748 ORTHO05D000394 1.4e-06 57.0 144 27.1
Gohir.D05G164600 Gossypium hirsutum HOM05D000748 ORTHO05D000394 2.4e-06 56.2 147 27.2
Lalb_Chr16g0383731 Lupinus albus HOM05D000748 ORTHO05D000394 2.4e-06 56.2 142 29.6
Hma1.2p1_0002F.1_g001860 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 3.2e-06 55.8 150 30.0
Hma1.2p1_0002F.1_g001870 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 3.2e-06 55.8 150 30.0
Hma1.2p1_1201F.1_g266543 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 3.2e-06 55.8 150 30.0
QL04p021564 Quercus lobata HOM05D000748 ORTHO05D000394 3.2e-06 55.8 145 26.2
QL05p040228 Quercus lobata HOM05D000748 ORTHO05D000394 4.2e-06 55.5 150 29.3
PGSC0003DMG400029690 Solanum tuberosum HOM05D000748 ORTHO05D000394 5.4e-06 55.1 140 28.6
vmacro15905 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 5.4e-06 55.1 151 28.5
Aqoxy1G02433 Aquilegia oxysepala HOM05D000748 ORTHO05D000394 9.2e-06 54.3 148 27.7
Peaxi162Scf00661g00521 Petunia axillaris HOM05D000748 ORTHO05D000394 9.2e-06 54.3 140 28.6
Solyc02g078250.4 Solanum lycopersicum HOM05D000748 ORTHO05D000394 9.2e-06 54.3 108 32.4
Sopen02g023110 Solanum pennellii HOM05D000748 ORTHO05D000394 9.2e-06 54.3 140 28.6


User provided reference genes

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