Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 4.5e-169 597.8 298 100.0
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 8.5e-75 284.6 192 74.0
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 3.6e-65 252.7 181 70.2
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 7.4e-63 245.0 194 62.4
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 5.9e-60 235.3 198 60.6
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 1.7e-59 233.8 196 61.2
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.2e-59 233.4 251 50.6
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 5.0e-59 232.3 199 61.3
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 1.5e-58 230.7 200 58.5
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 1.5e-58 230.7 196 61.7
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 1.5e-58 230.7 198 57.6
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 2.5e-58 229.9 196 61.7
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 2.5e-58 229.9 192 62.0
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 5.5e-58 228.8 198 59.1
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 7.2e-58 228.4 198 60.6
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 9.4e-58 228.0 197 55.8
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 9.4e-58 228.0 196 60.7
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.1e-57 226.9 196 60.2
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 2.1e-57 226.9 200 58.5
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 3.6e-57 226.1 204 57.8
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 4.7e-57 225.7 192 61.5
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 4.7e-57 225.7 195 61.0
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 6.1e-57 225.3 196 59.7
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 1.0e-56 224.6 200 59.0
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 1.8e-56 223.8 196 58.7
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 1.8e-56 223.8 196 59.7
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 3.0e-56 223.0 192 60.9
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 4.0e-56 222.6 196 59.7
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 5.2e-56 222.2 197 59.9
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 5.2e-56 222.2 192 60.4
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 8.8e-56 221.5 197 59.9
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 8.8e-56 221.5 196 60.2
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 1.5e-55 220.7 210 56.7
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 1.5e-55 220.7 192 62.0
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 2.0e-55 220.3 198 58.1
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 2.0e-55 220.3 196 59.7
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 2.6e-55 219.9 201 60.7
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 3.3e-55 219.5 196 58.2
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 3.3e-55 219.5 198 57.6
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 4.4e-55 219.2 194 59.8
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 5.7e-55 218.8 193 58.5
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 7.5e-55 218.4 193 59.1
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 2.2e-54 216.9 192 56.8
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 6.3e-54 215.3 196 56.1
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 1.1e-53 214.5 192 58.9
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 1.8e-53 213.8 195 54.9
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 1.8e-53 213.8 194 56.2
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 2.4e-53 213.4 194 57.2
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 3.1e-53 213.0 197 57.4
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 3.1e-53 213.0 192 57.3
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 3.1e-53 213.0 192 58.9
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 1.2e-52 211.1 196 60.2
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 1.2e-52 211.1 197 57.4
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 1.6e-52 210.7 195 53.8
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 2.0e-52 210.3 195 57.9
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 2.7e-52 209.9 196 55.6
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 3.5e-52 209.5 192 57.3
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 3.5e-52 209.5 192 56.8
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 1.0e-51 208.0 196 54.6
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.7e-51 207.2 197 56.3
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 2.9e-51 206.5 194 54.6
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 2.9e-51 206.5 199 54.8
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 3.8e-51 206.1 224 52.2
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 1.1e-50 204.5 131 76.3
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 2.5e-50 203.4 192 55.7
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 5.5e-50 202.2 204 52.0
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 5.5e-50 202.2 184 58.2
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 9.4e-50 201.4 187 54.0
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 1.6e-49 200.7 196 56.1
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 4.7e-49 199.1 196 52.6
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 8.0e-49 198.4 195 55.9
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 1.0e-48 198.0 206 51.0
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 3.0e-48 196.4 182 56.0
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 8.8e-48 194.9 202 50.5
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 1.5e-47 194.1 201 56.7
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 4.4e-47 192.6 196 53.6
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 1.7e-46 190.7 199 51.8
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 2.8e-46 189.9 203 50.2
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 2.8e-46 189.9 203 50.7
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 2.8e-46 189.9 199 51.8
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 6.3e-46 188.7 199 51.3
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 8.3e-46 188.3 199 50.8
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 1.1e-45 188.0 199 50.8
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 1.8e-45 187.2 187 52.4
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 2.4e-45 186.8 159 61.0
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 5.4e-45 185.7 193 50.3
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 9.1e-45 184.9 196 50.5
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 1.6e-44 184.1 191 53.9
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 3.5e-44 183.0 152 61.8
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 3.5e-44 183.0 168 56.0
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 3.2e-42 176.4 193 49.7
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 7.2e-42 175.3 195 47.2
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 1.6e-41 174.1 170 50.6
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 3.0e-40 169.9 187 50.3
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 4.0e-40 169.5 137 61.3
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 2.8e-38 163.3 160 53.1
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 3.7e-38 162.9 207 43.0
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 6.3e-38 162.2 137 60.6
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 4.1e-37 159.5 187 47.1
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 7.0e-37 158.7 133 60.2
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 2.9e-35 153.3 135 60.0
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 2.1e-33 147.1 135 58.5
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 4.7e-33 146.0 137 54.7
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 2.3e-32 143.7 132 54.5
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 2.9e-30 136.7 104 66.3
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.2e-23 114.8 136 48.5
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 4.4e-23 112.8 189 38.6
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 1.1e-21 108.2 115 48.7
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 6.0e-20 102.4 74 68.9
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 8.9e-16 88.6 92 50.0
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 5.8e-15 85.9 75 52.0
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 2.7e-12 77.0 134 37.3
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 2.3e-08 63.9 58 56.9
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 4.0e-08 63.2 193 25.9
MCO15G558 Micromonas commoda HOM05D007091 ORTHO05D008768 3.4e-07 60.1 171 27.5
BolC1t04291H Brassica oleracea HOM05D004766 ORTHO05D008768 2.2e-06 57.4 66 47.0
C09p32190 Brassica napus HOM05D004766 ORTHO05D008768 2.9e-06 57.0 81 40.7


User provided reference genes

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