Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15604 Striga asiatica HOM05D008540 ORTHO05D009454 4.5e-144 514.6 267 100.0
SGA_v2.0_scaffold50G18613 Striga asiatica HOM05D008540 ORTHO05D009454 1.8e-63 246.9 264 53.8
SGA_v2.0_scaffold18G08255 Striga asiatica HOM05D008540 ORTHO05D009454 5.6e-62 241.9 249 57.4
SGA_v2.0_scaffold41G15831 Striga asiatica HOM05D000007 ORTHO05D000039 7.1e-57 224.9 179 65.4
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 2.2e-34 150.2 86 82.6
SGA_v2.0_scaffold13G06538 Striga asiatica HOM05D008540 ORTHO05D009454 4.0e-23 112.8 106 65.1
SGA_v2.0_scaffold85G26589 Striga asiatica HOM05D012439 ORTHO05D009454 2.0e-22 110.5 283 29.7
SGA_v2.0_scaffold39G15240 Striga asiatica HOM05D008540 ORTHO05D009454 1.0e-18 98.2 114 43.9
SGA_v2.0_scaffold102G29842 Striga asiatica HOM05D008540 ORTHO05D009454 1.7e-18 97.4 125 39.2
SGA_v2.0_scaffold35G14227 Striga asiatica HOM05D008540 ORTHO05D009454 3.8e-18 96.3 119 42.0
SGA_v2.0_scaffold3G01511 Striga asiatica HOM05D008540 ORTHO05D009454 5.0e-18 95.9 119 42.0
SGA_v2.0_scaffold136G35018 Striga asiatica HOM05D008540 ORTHO05D009454 5.5e-17 92.4 242 31.0
SGA_v2.0_scaffold347G49542 Striga asiatica HOM05D008540 ORTHO05D009454 2.1e-16 90.5 101 45.5
SGA_v2.0_scaffold279G46775 Striga asiatica HOM05D008540 ORTHO05D009454 2.7e-16 90.1 241 31.1
SGA_v2.0_scaffold344G49484 Striga asiatica HOM05D008540 ORTHO05D009454 1.4e-15 87.8 243 30.9
SGA_v2.0_scaffold148G36475 Striga asiatica HOM05D008540 ORTHO05D009454 1.8e-15 87.4 112 42.0
SGA_v2.0_scaffold234G43637 Striga asiatica HOM05D012578 ORTHO05D009454 1.2e-14 84.7 200 32.5
SGA_v2.0_scaffold56G19924 Striga asiatica HOM05D008540 ORTHO05D009454 2.0e-14 84.0 119 38.7
SGA_v2.0_scaffold9G04899 Striga asiatica HOM05D008540 ORTHO05D009454 2.6e-14 83.6 213 33.8
SGA_v2.0_scaffold44G16794 Striga asiatica HOM05D008540 ORTHO05D009454 9.8e-14 81.6 121 35.5
SGA_v2.0_scaffold9G04915 Striga asiatica HOM05D008540 ORTHO05D009454 9.8e-14 81.6 121 35.5
SGA_v2.0_scaffold223G42818 Striga asiatica HOM05D008540 ORTHO05D009454 1.7e-13 80.9 115 37.4
SGA_v2.0_scaffold85G26668 Striga asiatica HOM05D008540 ORTHO05D009454 1.7e-13 80.9 88 44.3
SGA_v2.0_scaffold189G40365 Striga asiatica HOM05D008540 ORTHO05D009454 2.2e-13 80.5 133 36.8
SGA_v2.0_scaffold16G07574 Striga asiatica HOM05D015694 ORTHO05D009454 2.8e-13 80.1 230 26.1
SGA_v2.0_scaffold158G37503 Striga asiatica HOM05D008540 ORTHO05D009454 3.7e-13 79.7 115 37.4
SGA_v2.0_scaffold143G35711 Striga asiatica HOM05D008540 ORTHO05D009454 6.3e-13 79.0 80 42.5
SGA_v2.0_scaffold317G48444 Striga asiatica HOM05D008540 ORTHO05D009454 1.1e-12 78.2 211 28.4
SalBow3G3497 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.4e-12 77.8 166 32.5
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 1.4e-12 77.8 231 26.4
SGA_v2.0_scaffold96G29032 Striga asiatica HOM05D015694 ORTHO05D009454 1.4e-12 77.8 82 45.1
SGA_v2.0_scaffold43G16300 Striga asiatica HOM05D008540 ORTHO05D009454 1.8e-12 77.4 111 38.7
SGA_v2.0_scaffold54G19463 Striga asiatica HOM05D008540 ORTHO05D009454 3.1e-12 76.6 227 27.8
SGA_v2.0_scaffold74G24555 Striga asiatica HOM05D008540 ORTHO05D009454 3.1e-12 76.6 98 35.7
SGA_v2.0_scaffold33G13401 Striga asiatica HOM05D008540 ORTHO05D009454 4.1e-12 76.3 89 43.8
SGA_v2.0_scaffold104G30112 Striga asiatica HOM05D012578 ORTHO05D009454 9.1e-12 75.1 150 33.3
SGA_v2.0_scaffold84G26477 Striga asiatica HOM05D008540 ORTHO05D009454 1.2e-11 74.7 122 35.2
SGA_v2.0_scaffold230G43375 Striga asiatica HOM05D012578 ORTHO05D009454 2.0e-11 73.9 180 33.9
SalBow5G3871 Salvia bowleyana HOM05D012005 ORTHO05D009454 2.7e-11 73.6 167 29.3
SGA_v2.0_scaffold8G04365 Striga asiatica HOM05D008540 ORTHO05D009454 3.5e-11 73.2 115 35.7
SGA_v2.0_scaffold26G11231 Striga asiatica HOM05D012578 ORTHO05D009454 5.9e-11 72.4 144 31.9
SGA_v2.0_scaffold143G35735 Striga asiatica HOM05D008540 ORTHO05D009454 7.7e-11 72.0 139 33.8
SalBow5G1060 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.0e-10 71.6 239 27.6
SalBow5G2135 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.0e-10 71.6 239 27.6
SalBow8G2067 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.0e-10 71.6 102 40.2
SGA_v2.0_scaffold67G22715 Striga asiatica HOM05D012578 ORTHO05D009454 1.7e-10 70.9 144 31.2
SGA_v2.0_scaffold74G24718 Striga asiatica HOM05D012578 ORTHO05D009454 2.2e-10 70.5 122 36.9
SGA_v2.0_scaffold65G22136 Striga asiatica HOM05D008540 ORTHO05D009454 2.9e-10 70.1 87 42.5
SGA_v2.0_scaffold3282G54306 Striga asiatica HOM05D008540 ORTHO05D009454 3.8e-10 69.7 114 36.0
SGA_v2.0_scaffold99G29480 Striga asiatica HOM05D015694 ORTHO05D009454 6.5e-10 68.9 115 33.9
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 2.5e-09 67.0 101 32.7
SGA_v2.0_scaffold147G36331 Striga asiatica HOM05D012439 ORTHO05D009454 2.5e-09 67.0 98 31.6
SGA_v2.0_scaffold32G13010 Striga asiatica HOM05D012439 ORTHO05D009454 2.5e-09 67.0 98 31.6
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 3.2e-09 66.6 103 31.1
SGA_v2.0_scaffold470G52075 Striga asiatica HOM05D012439 ORTHO05D009454 3.2e-09 66.6 98 31.6
SGA_v2.0_scaffold59G20770 Striga asiatica HOM05D012439 ORTHO05D009454 4.2e-09 66.2 102 31.4
SGA_v2.0_scaffold86G26875 Striga asiatica HOM05D001768 ORTHO05D009454 5.5e-09 65.9 66 47.0
SGA_v2.0_scaffold132G34503 Striga asiatica HOM05D012439 ORTHO05D009454 9.4e-09 65.1 146 27.4
SalBow6G4158 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.2e-08 64.7 74 43.2
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-08 64.3 108 29.6
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-08 63.5 112 29.5
SalBow1G0358 Salvia bowleyana HOM05D014167 ORTHO05D009454 2.7e-08 63.5 107 34.6
SalBow3G4643 Salvia bowleyana HOM05D014167 ORTHO05D009454 2.7e-08 63.5 107 34.6
SalBow5G0855 Salvia bowleyana HOM05D012005 ORTHO05D009454 2.7e-08 63.5 111 32.4
SGA_v2.0_scaffold55G19709 Striga asiatica HOM05D012578 ORTHO05D009454 2.7e-08 63.5 149 30.2
SalBow5G3331 Salvia bowleyana HOM05D012005 ORTHO05D009454 3.6e-08 63.2 215 27.4
SGA_v2.0_scaffold332G48975 Striga asiatica HOM05D030749 ORTHO05D009454 6.1e-08 62.4 63 42.9
SGA_v2.0_scaffold5G02820 Striga asiatica HOM05D012578 ORTHO05D009454 6.1e-08 62.4 117 34.2
COL.COLO4_24548 Corchorus olitorius HOM05D009809 ORTHO05D011043 8.0e-08 62.0 135 28.9
SalBow1G6296 Salvia bowleyana HOM05D001508 ORTHO05D001381 1.0e-07 61.6 67 52.2
SGA_v2.0_scaffold66G22242 Striga asiatica HOM05D008540 ORTHO05D009454 1.4e-07 61.2 79 39.2
SalBow6G1843 Salvia bowleyana HOM05D014167 ORTHO05D360492 3.0e-07 60.1 110 33.6
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 4.0e-07 59.7 101 30.7
SGA_v2.0_scaffold48G17879 Striga asiatica HOM05D008540 ORTHO05D009454 4.0e-07 59.7 65 38.5
Dinv09483 Davidia involucrata HOM05D012890 ORTHO05D004107 5.2e-07 59.3 128 28.9
SalBow3G3176 Salvia bowleyana HOM05D014167 ORTHO05D354590 5.2e-07 59.3 110 32.7
SalBow5G4942 Salvia bowleyana HOM05D014167 ORTHO05D361886 5.2e-07 59.3 110 32.7
SGA_v2.0_scaffold101G29795 Striga asiatica HOM05D008540 ORTHO05D009454 5.2e-07 59.3 56 46.4
SGA_v2.0_scaffold139G35419 Striga asiatica HOM05D008540 ORTHO05D009454 6.8e-07 58.9 63 41.3
Dinv17061 Davidia involucrata HOM05D001632 ORTHO05D001534 8.8e-07 58.5 127 29.1
Dinv43005 Davidia involucrata HOM05D001632 ORTHO05D001534 8.8e-07 58.5 127 29.1
Dinv43092 Davidia involucrata HOM05D001632 ORTHO05D001534 8.8e-07 58.5 127 29.1
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.8e-07 58.5 104 31.7
SalBow4G2475 Salvia bowleyana HOM05D012439 ORTHO05D009454 8.8e-07 58.5 232 28.0
SalBow5G4693 Salvia bowleyana HOM05D012005 ORTHO05D009454 8.8e-07 58.5 216 26.4
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 1.5e-06 57.8 79 41.8
SGA_v2.0_scaffold355G49764 Striga asiatica HOM05D012439 ORTHO05D009454 1.5e-06 57.8 110 29.1
SGA_v2.0_scaffold64G21979 Striga asiatica HOM05D012439 ORTHO05D009454 1.5e-06 57.8 92 30.4
Rhsim11G0188900 Rhododendron simsii HOM05D059487 ORTHO05D004107 2.0e-06 57.4 151 27.8
SalBow8G3716 Salvia bowleyana HOM05D033145 ORTHO05D009454 2.0e-06 57.4 104 31.7
Ca_04121_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 2.6e-06 57.0 110 33.6
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 2.6e-06 57.0 100 31.0
SGA_v2.0_scaffold189G40361 Striga asiatica HOM05D012439 ORTHO05D009454 2.6e-06 57.0 88 30.7
Dinv13743 Davidia involucrata HOM05D012890 ORTHO05D011043 3.4e-06 56.6 128 28.9
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 5.7e-06 55.8 100 29.0
QL08p019187 Quercus lobata HOM05D008026 ORTHO05D010612 7.5e-06 55.5 128 28.1
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 9.8e-06 55.1 114 32.5


User provided reference genes

Program Settings