Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 4.2e-72 274.6 144 100.0
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.4e-38 163.3 140 62.9
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.4e-38 163.3 145 65.5
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.8e-38 162.9 145 62.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 1.7e-36 156.4 139 60.4
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 2.4e-35 152.5 134 63.4
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 1.6e-34 149.8 139 59.7
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.8e-34 147.5 139 59.0
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 1.0e-33 147.1 154 53.2
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 6.6e-33 144.4 140 56.4
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.5e-32 143.3 139 56.8
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 2.5e-32 142.5 140 55.7
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 2.5e-32 142.5 134 58.2
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 3.3e-32 142.1 139 57.6
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 4.3e-32 141.7 136 57.4
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 4.3e-32 141.7 134 57.5
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 4.3e-32 141.7 139 56.8
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 7.3e-32 141.0 135 58.5
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 9.5e-32 140.6 138 57.2
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 9.5e-32 140.6 139 56.8
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 1.6e-31 139.8 134 57.5
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 3.6e-31 138.7 139 56.1
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 6.2e-31 137.9 137 56.2
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 8.1e-31 137.5 139 55.4
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.1e-30 137.1 137 58.4
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-30 136.7 140 57.1
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.8e-30 136.3 132 56.8
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 3.1e-30 135.6 135 55.6
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.1e-30 135.6 134 55.2
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 3.1e-30 135.6 137 52.6
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 4.0e-30 135.2 134 56.7
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 6.8e-30 134.4 137 51.8
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 8.9e-30 134.0 137 56.2
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 1.2e-29 133.7 144 51.4
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 2.6e-29 132.5 135 52.6
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-29 132.5 140 52.1
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-29 132.5 140 52.1
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 2.6e-29 132.5 140 52.1
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.6e-29 132.5 137 54.7
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.6e-29 132.5 137 54.7
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 2.6e-29 132.5 139 52.5
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 3.4e-29 132.1 137 54.7
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 3.4e-29 132.1 137 53.3
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 3.4e-29 132.1 133 54.1
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 4.4e-29 131.7 140 51.4
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 5.8e-29 131.3 134 56.0
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 7.6e-29 131.0 137 54.7
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 7.6e-29 131.0 137 51.1
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 9.9e-29 130.6 135 54.1
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 9.9e-29 130.6 138 53.6
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 9.9e-29 130.6 136 53.7
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 9.9e-29 130.6 137 51.8
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 9.9e-29 130.6 133 54.9
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 1.3e-28 130.2 134 53.7
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 1.3e-28 130.2 124 57.3
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.7e-28 129.8 137 54.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 1.7e-28 129.8 137 51.1
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.7e-28 129.8 132 52.3
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 2.2e-28 129.4 153 49.7
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.2e-28 129.4 136 50.7
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.9e-28 129.0 132 52.3
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.9e-28 129.0 134 53.7
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.9e-28 129.0 140 51.4
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 3.8e-28 128.6 132 51.5
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 3.8e-28 128.6 134 51.5
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 4.9e-28 128.3 137 51.8
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 6.4e-28 127.9 136 50.7
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 6.4e-28 127.9 137 52.6
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 6.4e-28 127.9 137 53.3
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 6.4e-28 127.9 135 53.3
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 6.4e-28 127.9 137 52.6
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 8.4e-28 127.5 133 52.6
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.4e-27 126.7 134 51.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.4e-27 126.7 136 50.0
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.4e-27 125.9 135 51.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 3.2e-27 125.6 140 51.4
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 3.2e-27 125.6 132 50.8
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.2e-27 125.6 149 49.7
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 7.1e-27 124.4 144 47.9
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 9.2e-27 124.0 128 53.9
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.6e-26 123.2 135 51.9
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.6e-26 123.2 134 50.7
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.1e-26 122.9 137 49.6
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 2.1e-26 122.9 138 55.1
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 7.8e-26 120.9 134 50.0
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 7.8e-26 120.9 134 50.0
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 1.0e-25 120.6 135 47.4
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.3e-25 120.2 135 48.1
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 2.3e-25 119.4 137 49.6
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 3.0e-25 119.0 79 68.4
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 3.9e-25 118.6 151 45.7
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.1e-24 117.1 140 45.7
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 1.5e-24 116.7 134 50.7
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 7.3e-24 114.4 135 48.1
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.2e-23 113.6 156 43.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 1.6e-23 113.2 135 45.2
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 6.2e-23 111.3 138 47.1
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 8.1e-23 110.9 75 73.3
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.4e-22 109.4 115 53.9
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 4.0e-22 108.6 89 59.6
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 2.0e-21 106.3 78 62.8
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 4.4e-21 105.1 105 53.3
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.3e-20 103.6 86 55.8
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 4.9e-20 101.7 76 63.2
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.5e-13 78.6 136 37.5
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.5e-13 78.6 136 36.8
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 4.2e-11 72.0 107 43.9
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 4.2e-11 72.0 107 43.9
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 9.3e-11 70.9 134 36.6
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 4.6e-10 68.6 140 35.7
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 6.0e-10 68.2 91 39.6
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 6.0e-10 68.2 134 36.6
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 7.9e-10 67.8 95 44.2
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 1.0e-09 67.4 47 76.6
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 3.9e-09 65.5 101 42.6
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 6.7e-09 64.7 101 42.6
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 3.3e-08 62.4 98 42.9
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 4.3e-08 62.0 101 41.6
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 4.8e-07 58.5 75 45.3
arahy.Tifrunner.gnm1.ann1.Q46SAL Arachis hypogaea HOM05D006467 ORTHO05D008012 6.9e-06 54.7 42 59.5


User provided reference genes

Program Settings