Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 2.0e-138 495.7 245 100.0
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.0e-106 389.4 245 80.8
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 1.9e-93 346.3 250 74.8
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 2.7e-87 325.9 250 69.2
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 3.6e-87 325.5 252 71.0
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.4e-86 323.6 253 70.8
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.0e-85 319.7 246 68.3
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.6e-85 319.3 251 68.5
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 7.4e-85 317.8 246 69.1
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 9.7e-85 317.4 248 67.7
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 4.8e-84 315.1 248 69.8
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 8.2e-84 314.3 247 70.0
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.4e-83 313.5 248 69.0
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.8e-83 313.2 248 69.4
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 3.1e-83 312.4 245 68.6
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 4.1e-83 312.0 251 67.7
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 9.1e-83 310.8 242 69.4
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 9.1e-83 310.8 246 69.5
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 9.1e-83 310.8 246 69.5
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 2.0e-82 309.7 248 68.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 2.0e-82 309.7 248 68.5
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.4e-82 308.9 246 68.7
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 4.5e-82 308.5 248 68.5
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 4.5e-82 308.5 243 66.3
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 5.9e-82 308.1 248 67.3
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.9e-82 308.1 248 67.3
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 7.7e-82 307.8 243 66.3
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 7.7e-82 307.8 242 65.7
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.0e-81 307.4 246 67.9
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 1.7e-81 306.6 246 67.9
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.2e-81 306.2 245 67.3
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 2.9e-81 305.8 250 68.0
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 2.9e-81 305.8 245 67.3
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 3.8e-81 305.4 254 63.4
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 5.0e-81 305.1 243 69.1
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 6.5e-81 304.7 245 67.3
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 8.5e-81 304.3 243 67.1
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.1e-80 303.9 243 66.3
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.1e-80 303.9 250 65.6
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.4e-80 303.5 257 66.1
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.4e-80 303.5 250 66.8
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.2e-80 302.4 251 67.3
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 4.2e-80 302.0 247 66.0
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 5.5e-80 301.6 246 66.3
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.2e-79 300.4 240 65.4
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.0e-78 297.4 241 64.3
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 2.3e-78 296.2 253 66.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 2.3e-78 296.2 246 65.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 3.9e-78 295.4 246 65.4
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 3.9e-78 295.4 246 66.3
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 5.2e-78 295.0 292 58.2
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 6.7e-78 294.7 255 65.1
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 6.7e-78 294.7 275 59.3
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 4.4e-77 292.0 255 64.7
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 4.4e-77 292.0 242 62.8
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 5.7e-77 291.6 277 61.0
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 7.4e-77 291.2 245 66.1
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 7.4e-77 291.2 247 64.8
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 9.7e-77 290.8 250 66.8
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 9.7e-77 290.8 250 66.8
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.8e-76 289.3 248 63.3
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.8e-76 289.3 248 65.7
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.7e-76 288.9 245 62.9
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.1e-75 287.3 194 73.7
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 1.4e-75 287.0 260 60.8
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 1.8e-75 286.6 245 63.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 9.1e-75 284.3 250 62.4
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.6e-74 283.5 245 62.9
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.0e-74 283.1 245 62.9
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 2.6e-74 282.7 258 59.3
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.7e-73 280.0 244 63.9
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 2.2e-73 279.6 248 61.7
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 2.2e-73 279.6 243 60.9
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 2.9e-73 279.3 249 61.8
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 5.0e-73 278.5 181 74.0
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 8.5e-73 277.7 245 60.4
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.5e-72 276.9 220 68.2
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 3.2e-72 275.8 242 61.2
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 4.2e-72 275.4 248 61.7
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 7.2e-72 274.6 163 81.6
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-71 272.3 254 62.6
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 6.1e-71 271.6 275 55.3
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 6.1e-71 271.6 251 61.4
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 6.1e-71 271.6 251 61.4
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 8.0e-71 271.2 160 78.8
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-70 270.4 245 62.4
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 3.0e-70 269.2 245 58.8
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 4.0e-70 268.9 246 59.3
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 4.0e-70 268.9 286 55.2
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 6.7e-70 268.1 245 60.8
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 6.7e-70 268.1 245 60.8
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 8.8e-70 267.7 245 60.8
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 1.2e-69 267.3 251 58.6
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.0e-69 266.5 245 60.8
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.3e-65 253.8 238 59.2
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.2e-63 247.3 169 72.8
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 3.4e-61 239.2 246 58.1
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 2.4e-59 233.0 130 87.7
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 2.7e-58 229.6 243 51.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 6.5e-57 224.9 192 64.6
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 8.6e-57 224.6 194 59.8
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 5.5e-56 221.9 130 82.3
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.6e-55 219.2 245 53.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 3.6e-55 219.2 190 58.4
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.4e-54 217.2 249 54.2
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.4e-51 207.2 110 90.0
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.9e-48 196.8 186 62.9
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 2.1e-47 193.4 131 69.5
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 9.8e-45 184.5 190 57.9
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 8.6e-41 171.4 197 53.3
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.1e-38 162.9 157 60.5
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.3e-36 157.5 90 82.2
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 6.2e-31 138.7 107 62.6
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 1.3e-28 131.0 152 48.0
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 1.2e-26 124.4 95 63.2
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 6.2e-23 112.1 114 58.8
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 8.9e-22 108.2 54 94.4
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.0e-17 94.7 49 87.8
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 3.9e-17 92.8 97 46.4
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 4.3e-16 89.4 56 75.0
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 5.4e-11 72.4 66 54.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 9.3e-11 71.6 38 78.9
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 9.6e-08 61.6 31 87.1
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 2.1e-07 60.5 48 60.4
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-06 56.6 100 43.0
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-06 55.8 104 42.3


User provided reference genes

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