Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 4.3e-79 297.7 133 100.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 2.6e-36 155.6 111 61.3
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 2.6e-36 155.6 111 61.3
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 2.6e-36 155.6 111 61.3
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 7.7e-36 154.1 111 62.2
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 2.2e-35 152.5 111 60.4
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 6.5e-35 151.0 111 59.5
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 6.5e-35 151.0 110 60.9
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 8.5e-35 150.6 110 60.0
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 8.5e-35 150.6 110 57.3
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.5e-34 149.8 110 58.2
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.9e-34 149.4 110 60.0
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.9e-34 149.4 110 60.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.9e-34 149.4 111 60.4
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 2.5e-34 149.1 110 58.2
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 2.5e-34 149.1 110 59.1
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 3.2e-34 148.7 110 59.1
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.2e-34 148.7 111 58.6
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 3.2e-34 148.7 110 59.1
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 3.2e-34 148.7 110 58.2
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 4.2e-34 148.3 110 59.1
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 4.2e-34 148.3 110 59.1
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 4.2e-34 148.3 120 55.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.2e-33 146.7 111 59.5
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 58.2
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 58.2
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 58.2
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 58.2
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 58.2
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.6e-33 146.4 110 57.3
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 2.1e-33 146.0 111 59.5
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 2.1e-33 146.0 111 57.7
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 3.6e-33 145.2 111 57.7
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 4.7e-33 144.8 110 58.2
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 4.7e-33 144.8 111 56.8
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 6.1e-33 144.4 110 58.2
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 8.0e-33 144.1 110 55.5
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 8.0e-33 144.1 110 55.5
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 8.0e-33 144.1 111 57.7
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 8.0e-33 144.1 111 56.8
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.0e-32 143.7 111 56.8
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 1.4e-32 143.3 110 57.3
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.8e-32 142.9 111 55.9
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.8e-32 142.9 111 56.8
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 1.8e-32 142.9 111 57.7
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 1.8e-32 142.9 111 57.7
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 1.8e-32 142.9 111 57.7
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 2.3e-32 142.5 111 55.9
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.3e-32 142.5 111 56.8
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 4.0e-32 141.7 110 56.4
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 4.0e-32 141.7 111 56.8
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 4.0e-32 141.7 110 55.5
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 5.2e-32 141.4 110 53.6
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 5.2e-32 141.4 111 56.8
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 6.8e-32 141.0 134 50.7
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 6.8e-32 141.0 111 56.8
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 8.8e-32 140.6 109 56.9
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 8.8e-32 140.6 111 56.8
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.5e-31 139.8 109 56.9
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 1.5e-31 139.8 111 55.9
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.5e-31 139.8 111 55.9
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.5e-31 139.8 111 56.8
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 2.0e-31 139.4 114 57.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 2.0e-31 139.4 110 54.5
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 2.0e-31 139.4 110 54.5
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 2.6e-31 139.0 111 56.8
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 4.4e-31 138.3 109 56.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 5.7e-31 137.9 108 52.8
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 5.7e-31 137.9 122 52.5
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.3e-30 136.7 111 55.9
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.3e-30 136.7 111 55.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.7e-30 136.3 111 55.0
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 3.7e-30 135.2 109 54.1
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.7e-30 135.2 111 54.1
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 4.8e-30 134.8 110 53.6
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 4.8e-30 134.8 111 53.2
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 1.8e-29 132.9 108 53.7
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.7e-28 129.0 99 59.6
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 2.7e-28 129.0 106 55.7
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.2e-27 125.9 110 49.1
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 2.9e-27 125.6 169 37.3
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.8e-27 125.2 110 48.2
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.1e-26 123.6 109 49.5
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.9e-26 122.9 109 47.7
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 3.2e-26 122.1 109 52.3
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 1.2e-25 120.2 98 55.1
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.6e-25 119.8 97 54.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 1.0e-24 117.1 109 49.5
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.8e-24 114.0 111 49.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 8.8e-24 114.0 111 49.5
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.3e-22 110.2 108 47.2
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.4e-21 106.7 109 45.9
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.2e-20 103.6 111 44.1
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 2.1e-17 92.8 111 43.2
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.3e-16 89.4 113 42.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.3e-16 89.4 78 51.3
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 7.5e-15 84.3 111 38.7
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 1.7e-11 73.2 51 54.9
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.6e-09 65.5 40 70.0


User provided reference genes

Program Settings