Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 6.4e-260 900.2 451 100.0
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 2.0e-184 649.4 446 74.9
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 1.6e-181 639.8 443 73.6
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 1.0e-172 610.5 476 67.4
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 9.6e-163 577.4 447 64.9
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 3.1e-161 572.4 447 63.8
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 5.2e-161 571.6 447 63.8
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 1.2e-157 560.5 446 63.2
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 1.1e-155 553.9 450 62.9
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 2.5e-155 552.7 442 63.6
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 4.3e-155 552.0 447 62.0
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 4.3e-155 552.0 447 62.0
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 4.8e-154 548.5 573 53.8
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 6.2e-154 548.1 494 58.3
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 3.4e-152 542.3 448 61.8
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 4.5e-152 542.0 475 58.7
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 7.6e-152 541.2 449 61.2
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 9.9e-152 540.8 448 61.8
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 1.7e-151 540.0 447 62.0
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 8.4e-151 537.7 447 62.2
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 4.2e-150 535.4 430 63.0
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 6.0e-149 531.6 447 61.5
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 7.9e-149 531.2 444 61.0
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 1.0e-148 530.8 447 61.1
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 1.3e-148 530.4 442 61.1
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 3.0e-148 529.3 451 60.3
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 6.7e-148 528.1 462 60.4
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 8.7e-148 527.7 444 60.8
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 1.1e-147 527.3 446 61.2
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 3.3e-147 525.8 447 59.7
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.3e-147 525.8 456 60.1
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 5.6e-147 525.0 444 61.0
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 9.6e-147 524.2 456 59.9
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.3e-146 523.9 446 59.0
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 1.6e-146 523.5 447 59.1
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 2.1e-146 523.1 444 59.5
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 8.1e-146 521.2 442 60.2
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 1.1e-145 520.8 443 60.5
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 1.1e-145 520.8 443 60.5
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.3e-145 518.5 462 59.5
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 6.9e-145 518.1 444 60.6
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 1.2e-144 517.3 444 60.8
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 2.0e-144 516.5 443 58.2
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 7.6e-144 514.6 516 53.7
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 1.7e-143 513.5 442 60.4
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 2.9e-143 512.7 444 57.2
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 2.9e-143 512.7 397 64.5
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 2.4e-142 509.6 444 59.5
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 3.2e-142 509.2 448 58.5
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 3.2e-142 509.2 448 58.5
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 5.5e-142 508.4 448 58.9
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 1.6e-141 506.9 443 58.0
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 1.6e-141 506.9 447 57.3
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 2.1e-141 506.5 443 57.8
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 4.6e-141 505.4 445 59.1
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 7.9e-141 504.6 447 59.1
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 1.0e-140 504.2 440 58.4
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 5.1e-140 501.9 442 60.9
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 8.7e-140 501.1 443 57.8
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 8.7e-140 501.1 447 57.5
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 3.3e-139 499.2 444 56.8
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 4.3e-139 498.8 465 56.3
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 1.3e-138 497.3 476 53.4
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 2.1e-138 496.5 435 57.7
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 3.7e-138 495.7 443 57.6
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 3.1e-137 492.7 442 59.5
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 1.5e-136 490.3 444 56.3
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 7.6e-136 488.0 393 63.1
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 8.4e-135 484.6 374 65.2
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 7.1e-134 481.5 399 59.6
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 4.6e-133 478.8 444 55.2
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 1.3e-132 477.2 396 61.4
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 1.1e-131 474.2 399 59.1
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 1.3e-130 470.7 423 58.9
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 3.7e-130 469.2 557 46.7
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 7.7e-128 461.5 475 52.6
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 2.2e-127 459.9 448 52.9
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 3.9e-124 449.1 446 54.0
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 1.5e-123 447.2 454 55.1
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 4.3e-123 445.7 432 53.5
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 4.7e-117 425.6 445 49.7
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 6.7e-116 421.8 378 58.5
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 1.8e-108 397.1 329 61.1
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 2.3e-108 396.7 411 51.8
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 2.3e-108 396.7 435 47.4
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 3.9e-108 396.0 336 61.0
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.8e-105 387.1 397 52.6
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 1.2e-101 374.4 432 45.8
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 2.2e-98 363.6 323 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 1.1e-97 361.3 435 47.4
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 1.7e-95 354.0 300 58.3
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 1.2e-93 347.8 325 55.4
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 2.7e-93 346.7 436 44.0
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 3.0e-92 343.2 264 64.0
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 2.8e-90 336.7 299 55.5
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 3.0e-84 316.6 292 58.6
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 8.0e-77 292.0 372 43.0
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 3.5e-72 276.6 281 52.3
Os01g0857300 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D008018 3.9e-55 219.9 212 51.9
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 9.6e-54 215.3 276 46.0
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 9.9e-51 205.3 173 60.7
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.2e-43 181.8 316 38.0
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 2.6e-43 180.6 340 35.9
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 5.4e-41 172.9 167 56.3
HPP92_006792 Vanilla planifolia HOM05D001312 ORTHO05D008018 1.2e-40 171.8 222 43.2
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 2.7e-40 170.6 147 61.2
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 3.0e-39 167.2 142 59.9
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 2.0e-35 154.5 123 63.4
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 2.2e-34 151.0 158 52.5
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 6.4e-34 149.4 196 44.9
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 1.0e-31 142.1 124 58.9
DCAR_015030 Daucus carota HOM05D001312 ORTHO05D008018 5.6e-30 136.3 94 70.2
Zm00001eb059120 Zea mays HOM05D000212 ORTHO05D008018 1.1e-28 132.1 102 59.8
Lalb_Chr21g0315441 Lupinus albus HOM05D001312 ORTHO05D008018 2.4e-28 131.0 92 66.3
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 2.8e-21 107.5 98 57.1
Cre13.g583100 Chlamydomonas reinhardtii HOM05D001312 ORTHO05D008018 5.0e-18 96.7 414 26.1
VMungo0251G1834 Vigna mungo HOM05D001312 ORTHO05D008018 9.0e-12 75.9 47 68.1
Zm00001eb059130 Zea mays HOM05D000212 ORTHO05D002824 3.4e-11 73.9 61 59.0
A03p01370 Brassica napus HOM05D001312 ORTHO05D008018 1.7e-10 71.6 72 50.0
Zm00001eb009840 Zea mays HOM05D001312 ORTHO05D008018 8.5e-10 69.3 62 50.0
arahy.Tifrunner.gnm1.ann1.UHL2QJ Arachis hypogaea HOM05D000705 ORTHO05D008018 4.2e-09 67.0 41 65.9
BraA03t09516Z Brassica rapa HOM05D001312 ORTHO05D008018 3.3e-06 57.4 60 48.3


User provided reference genes

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