Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15427 Striga asiatica HOM05D009867 ORTHO05D011993 7.6e-305 1049.7 524 100.0
SGA_v2.0_scaffold134G34716 Striga asiatica HOM05D028433 ORTHO05D011993 4.0e-19 100.5 445 31.0
Os09g0263972 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 6.4e-17 93.2 150 39.3
Os06g0642550 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 3.0e-14 84.3 153 37.9
Os10g0196400 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 9.5e-13 79.3 148 38.5
SGA_v2.0_scaffold134G34736 Striga asiatica HOM05D028433 ORTHO05D011993 3.6e-12 77.4 101 50.5
Os09g0441250 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 6.2e-12 76.6 133 39.1
Os09g0530350 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 1.2e-10 72.4 167 34.7
SGA_v2.0_scaffold313G48310 Striga asiatica HOM05D009867 ORTHO05D011993 2.6e-10 71.2 148 32.4
Os02g0186950 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 4.9e-09 67.0 139 36.0
Os03g0367150 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 1.1e-08 65.9 139 38.8
Zm00001eb164770 Zea mays HOM05D009867 ORTHO05D011993 1.1e-08 65.9 160 30.6
Os04g0101550 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 2.4e-08 64.7 142 36.6
Os05g0494050 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 3.2e-08 64.3 160 33.8
Os06g0640599 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 2.1e-07 61.6 125 36.8
Os03g0417750 Oryza sativa ssp. japonica HOM05D009867 ORTHO05D011993 7.8e-07 59.7 144 34.0
Eucgr.K02397 Eucalyptus grandis HOM05D009867 ORTHO05D011993 6.6e-06 56.6 141 30.5


User provided reference genes

Program Settings