Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 3.2e-114 415.2 227 100.0
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 4.8e-46 188.7 146 67.1
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 2.4e-45 186.4 147 75.5
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 3.8e-43 179.1 151 64.2
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 1.9e-42 176.8 151 62.3
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 3.6e-41 172.6 155 60.6
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 3.5e-36 156.0 151 58.3
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 4.5e-36 155.6 152 57.2
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 4.5e-36 155.6 150 58.7
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 5.0e-35 152.1 146 57.5
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.5e-34 150.6 152 57.9
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 1.9e-34 150.2 153 58.8
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 4.2e-34 149.1 144 57.6
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 9.4e-34 147.9 144 56.9
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 9.4e-34 147.9 144 56.9
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 1.6e-33 147.1 145 56.6
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 2.7e-33 146.4 148 60.1
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 2.7e-33 146.4 151 57.0
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 6.1e-33 145.2 154 55.2
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 8.0e-33 144.8 151 55.6
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 1.8e-32 143.7 148 56.8
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 1.8e-32 143.7 149 57.7
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 2.3e-32 143.3 151 54.3
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 2.3e-32 143.3 147 55.8
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.3e-32 143.3 122 59.0
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 3.0e-32 142.9 151 56.3
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 4.0e-32 142.5 148 53.4
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 4.0e-32 142.5 151 56.3
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 6.8e-32 141.7 147 55.1
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 6.8e-32 141.7 149 54.4
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 8.8e-32 141.4 154 56.5
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 1.2e-31 141.0 144 52.8
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 1.2e-31 141.0 149 53.7
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 2.0e-31 140.2 150 57.3
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 2.6e-31 139.8 148 52.7
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 2.6e-31 139.8 147 56.5
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 3.4e-31 139.4 149 54.4
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 5.7e-31 138.7 150 54.7
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 7.5e-31 138.3 149 53.0
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 9.8e-31 137.9 143 53.1
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 1.3e-30 137.5 149 53.0
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 1.7e-30 137.1 144 63.9
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.2e-30 136.7 144 54.2
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 2.2e-30 136.7 157 52.9
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 3.7e-30 136.0 148 51.4
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 6.3e-30 135.2 149 54.4
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 6.3e-30 135.2 143 55.9
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 8.3e-30 134.8 148 53.4
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 8.3e-30 134.8 144 53.5
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 1.1e-29 134.4 149 54.4
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 1.1e-29 134.4 144 52.1
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.4e-29 134.0 149 55.0
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.8e-29 133.7 151 52.3
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 1.8e-29 133.7 145 54.5
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 2.4e-29 133.3 152 53.3
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.1e-29 132.9 148 52.0
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 4.1e-29 132.5 145 52.4
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 4.1e-29 132.5 150 50.7
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 5.4e-29 132.1 151 51.7
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 7.0e-29 131.7 144 51.4
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 9.1e-29 131.3 149 53.0
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 9.1e-29 131.3 149 58.4
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 9.1e-29 131.3 146 52.7
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 9.1e-29 131.3 148 51.4
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 9.1e-29 131.3 148 51.4
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.6e-28 130.6 145 50.3
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 2.0e-28 130.2 149 53.0
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 3.5e-28 129.4 144 50.7
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 3.5e-28 129.4 144 53.5
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 3.5e-28 129.4 155 52.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.5e-28 129.4 148 50.7
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 5.9e-28 128.6 152 51.3
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 2.2e-27 126.7 151 49.7
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 2.2e-27 126.7 149 51.0
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 3.8e-27 125.9 152 50.7
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.1e-26 124.4 148 50.7
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.1e-26 124.4 148 50.7
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 1.9e-26 123.6 138 57.2
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.9e-26 123.6 119 53.8
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 2.5e-26 123.2 148 48.6
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 5.5e-26 122.1 138 52.9
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 7.2e-26 121.7 158 50.6
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 7.2e-26 121.7 160 47.5
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 9.4e-26 121.3 143 52.4
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.2e-25 120.9 151 48.3
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 4.7e-25 119.0 104 58.7
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 6.1e-25 118.6 135 52.6
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 6.1e-25 118.6 141 47.5
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.8e-24 117.1 149 45.6
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 3.0e-24 116.3 141 46.8
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 4.0e-24 115.9 128 50.0
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 4.0e-24 115.9 164 41.5
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 4.0e-24 115.9 149 44.3
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 8.8e-24 114.8 137 45.3
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 4.4e-23 112.5 132 47.0
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 5.7e-23 112.1 129 52.7
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 5.7e-23 112.1 105 55.2
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 2.2e-22 110.2 152 47.4
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 2.2e-22 110.2 106 51.9
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 4.9e-22 109.0 130 50.0
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 6.3e-22 108.6 131 51.9
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 1.8e-21 107.1 85 63.5
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 1.2e-20 104.4 144 50.7
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 5.9e-20 102.1 114 47.4
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 5.9e-20 102.1 168 42.3
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 5.6e-18 95.5 130 43.8
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 5.6e-18 95.5 148 44.6
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.0e-16 91.3 141 44.7
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.5e-15 87.4 112 49.1
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.5e-15 87.4 112 49.1
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 7.5e-15 85.1 100 52.0
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 7.5e-15 85.1 128 44.5
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 9.8e-15 84.7 99 50.5
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 2.2e-14 83.6 99 49.5
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 2.2e-14 83.6 99 49.5
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 4.1e-13 79.3 136 42.6
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 7.0e-13 78.6 83 57.8
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 7.0e-13 78.6 83 57.8
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 3.5e-12 76.3 91 42.9
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 7.3e-10 68.6 78 53.8
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 2.1e-09 67.0 109 45.0
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.0e-07 60.5 141 33.3
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 9.8e-07 58.2 85 40.0


User provided reference genes

Program Settings