Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 2.3e-109 401.0 205 100.0
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 1.4e-61 242.3 164 78.0
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.8e-38 164.9 165 59.4
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 3.4e-28 131.3 131 53.4
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 7.5e-28 130.2 126 53.2
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 1.3e-27 129.4 150 45.3
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 9.5e-23 113.2 137 46.7
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.8e-22 111.7 139 46.0
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 8.0e-22 110.2 171 42.1
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.8e-21 109.0 128 47.7
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 1.8e-21 109.0 128 46.9
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 4.0e-21 107.8 128 46.1
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.2e-20 106.3 146 43.8
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 1.9e-18 99.0 138 42.0
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 5.4e-18 97.4 171 35.7
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.2e-17 96.3 130 42.3
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 7.8e-17 93.6 132 40.9
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 1.3e-16 92.8 170 37.1
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 1.7e-16 92.4 131 40.5
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 3.9e-16 91.3 130 39.2
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 3.9e-16 91.3 182 35.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 5.1e-16 90.9 132 40.9
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 1.5e-15 89.4 130 39.2
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 1.5e-15 89.4 176 70.5
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 5.6e-15 87.4 130 40.0
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 7.3e-15 87.0 130 38.5
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 9.5e-15 86.7 165 37.6
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 1.2e-14 86.3 129 36.4
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 1.2e-14 86.3 124 38.7
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 2.1e-14 85.5 167 61.1
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.1e-14 85.5 168 36.9
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 2.8e-14 85.1 165 37.0
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 2.8e-14 85.1 132 38.6
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 2.8e-14 85.1 148 31.8
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 4.7e-14 84.3 129 34.9
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 2.3e-13 82.0 116 36.2
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 5.2e-13 80.9 163 36.8
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 8.9e-13 80.1 132 38.6
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 2.0e-12 79.0 123 37.4
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 2.0e-12 79.0 143 33.6
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.9e-11 75.1 168 33.3
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.9e-11 75.1 166 34.3
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 1.4e-10 72.8 134 30.6
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.9e-10 72.4 133 32.3
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 2.4e-10 72.0 137 32.8
Actinidia39878 Actinidia chinensis HOM05D007410 ORTHO05D009500 3.2e-10 71.6 57 49.1
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 4.1e-10 71.2 166 33.7
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 4.1e-10 71.2 120 36.7
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 5.4e-10 70.9 167 57.5
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 5.4e-10 70.9 130 31.5
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 7.1e-10 70.5 124 34.7
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 3.5e-09 68.2 183 31.1
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 3.5e-09 68.2 145 31.7
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 4.6e-09 67.8 171 32.7
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 6.0e-09 67.4 131 32.1
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 7.8e-09 67.0 183 31.1
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 7.8e-09 67.0 174 31.0
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.0e-08 66.6 167 30.5
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 2.3e-08 65.5 131 32.1
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 2.3e-08 65.5 158 29.7
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 3.0e-08 65.1 183 29.5
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 5.1e-08 64.3 137 30.7
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 6.6e-08 63.9 167 30.5
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 6.6e-08 63.9 168 29.2
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 8.6e-08 63.5 128 30.5
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 2.5e-07 62.0 146 28.1
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 3.3e-07 61.6 98 37.8
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 3.3e-07 61.6 98 37.8
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 7.3e-07 60.5 98 36.7
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 2.1e-06 58.9 129 31.0
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.1e-06 58.9 170 30.0


User provided reference genes

Program Settings