Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 7.2e-295 1016.5 529 100.0
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.4e-159 565.5 525 62.1
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 4.7e-153 545.4 531 60.8
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 4.4e-151 538.9 532 58.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.3e-129 467.6 529 52.6
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.6e-113 414.1 594 46.6
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.0e-111 407.1 530 46.6
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.8e-110 402.9 531 47.8
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.3e-105 387.9 553 47.2
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 6.9e-104 382.1 551 45.7
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 9.0e-104 381.7 546 46.0
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.2e-103 381.3 564 43.3
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.5e-103 379.4 540 45.9
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.5e-103 379.4 546 45.8
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 1.0e-102 378.3 550 45.8
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 2.9e-102 376.7 561 43.7
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 5.5e-101 372.5 550 44.9
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 5.5e-101 372.5 551 45.2
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 9.4e-101 371.7 659 40.7
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 9.4e-101 371.7 531 44.4
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 3.6e-100 369.8 557 44.2
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 6.1e-100 369.0 546 45.6
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.8e-99 367.5 530 43.2
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 3.0e-99 366.7 550 43.6
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 3.9e-99 366.3 546 44.9
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 3.9e-99 366.3 540 43.7
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 5.1e-99 365.9 550 43.8
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 5.1e-99 365.9 546 44.7
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.3e-98 363.2 536 44.0
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.3e-97 361.3 550 44.5
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 3.7e-97 359.8 551 43.9
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 8.2e-97 358.6 554 44.8
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 5.3e-96 355.9 549 43.5
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 9.1e-96 355.1 541 44.4
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 2.0e-95 354.0 546 43.0
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 5.9e-95 352.4 548 44.3
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.2e-94 350.5 544 43.0
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 5.0e-94 349.4 539 43.0
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 5.0e-94 349.4 570 43.9
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 6.5e-94 349.0 601 41.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 4.2e-93 346.3 532 43.4
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 4.2e-93 346.3 545 43.1
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 7.2e-93 345.5 601 40.3
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.2e-92 344.7 553 43.2
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.1e-92 344.0 541 41.6
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.7e-92 343.6 549 43.2
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.7e-92 343.6 545 42.9
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 7.9e-92 342.0 547 42.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.0e-91 341.7 537 42.8
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.0e-91 341.7 592 40.7
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 1.4e-91 341.3 539 42.5
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.3e-91 340.5 595 40.3
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 4.4e-90 336.3 595 38.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 5.7e-90 335.9 549 41.9
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 7.4e-90 335.5 536 42.2
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 9.7e-90 335.1 545 41.1
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 8.2e-89 332.0 533 41.8
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.8e-88 330.9 571 40.3
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 4.1e-88 329.7 536 43.1
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 3.8e-86 323.2 505 44.0
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.8e-86 323.2 489 44.2
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.8e-83 314.3 530 41.7
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.8e-81 306.2 610 38.4
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 3.5e-79 300.1 551 39.2
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 4.2e-77 293.1 456 43.6
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 5.5e-77 292.7 454 43.2
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.6e-76 291.2 579 38.9
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 6.1e-76 289.3 368 48.9
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.2e-74 285.0 587 37.1
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.1e-69 268.5 616 34.7
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 3.2e-69 266.9 453 40.0
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.2e-68 265.0 540 34.3
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.7e-68 263.8 548 33.9
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 6.1e-68 262.7 558 33.2
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 4.0e-67 260.0 458 40.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.4e-66 256.5 506 34.6
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.7e-65 254.6 539 34.1
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 3.1e-64 250.4 559 36.5
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.6e-60 238.0 532 36.1
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.6e-58 230.7 448 38.6
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 2.1e-52 211.1 470 33.6
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 4.9e-41 173.3 404 33.4
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.5e-37 161.8 172 57.0
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.5e-37 161.8 172 57.0
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 7.3e-37 159.5 548 27.7
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 3.1e-35 154.1 242 43.4
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 3.2e-32 144.1 492 27.0
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 3.9e-30 137.1 127 54.3
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.5e-29 134.4 374 33.4
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 1.8e-27 128.3 224 35.3
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 3.1e-27 127.5 439 29.6
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.6e-23 115.2 529 24.8
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 8.7e-22 109.4 337 31.8
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.5e-21 107.8 122 50.8
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 3.3e-21 107.5 175 43.4
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 5.6e-21 106.7 167 42.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.1e-13 82.4 171 37.4
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 6.2e-12 76.6 744 21.9
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 3.5e-07 60.8 72 41.7
Lj2g0016961 Lotus japonicus HOM05D002884 ORTHO05D003178 4.6e-07 60.5 80 38.8
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 7.9e-07 59.7 94 36.2
Nn1g01376 Nelumbo nucifera HOM05D002884 ORTHO05D003178 1.0e-06 59.3 85 37.6
Actinidia14527 Actinidia chinensis HOM05D002884 ORTHO05D003178 1.3e-06 58.9 94 34.0
Actinidia02037 Actinidia chinensis HOM05D002884 ORTHO05D003178 1.8e-06 58.5 94 34.0
ECA240G2117 Erigeron canadensis HOM05D002884 ORTHO05D003178 1.8e-06 58.5 94 35.1
Lalb_Chr16g0377211 Lupinus albus HOM05D002884 ORTHO05D003178 2.3e-06 58.2 79 38.0
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 3.0e-06 57.8 88 38.6
Gohir.A12G225400 Gossypium hirsutum HOM05D002884 ORTHO05D003178 3.9e-06 57.4 94 34.0
Gohir.D09G187200 Gossypium hirsutum HOM05D002884 ORTHO05D003178 3.9e-06 57.4 94 35.1
Gorai.006G210000 Gossypium raimondii HOM05D002884 ORTHO05D003178 3.9e-06 57.4 94 35.1
HPP92_022610 Vanilla planifolia HOM05D002884 ORTHO05D003178 3.9e-06 57.4 72 38.9
Glyma.17G131100 Glycine max HOM05D002884 ORTHO05D003178 5.1e-06 57.0 79 35.4
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 5.1e-06 57.0 94 34.0
Sabra14G0056200 Salix brachista HOM05D002884 ORTHO05D003178 6.7e-06 56.6 96 30.2
Manes.01G261500 Manihot esculenta HOM05D002884 ORTHO05D003178 8.7e-06 56.2 73 38.4
Potri.014G075600 Populus trichocarpa HOM05D002884 ORTHO05D003178 8.7e-06 56.2 72 36.1


User provided reference genes

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