Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold406G51043 Striga asiatica HOM05D003294 ORTHO05D004060 2.6e-126 456.8 369 100.0
Oeu006702.1 Olea europaea HOM05D003294 ORTHO05D004060 9.4e-52 209.1 134 75.4
PGR142G3893 Punica granatum HOM05D003294 ORTHO05D004060 9.4e-52 209.1 138 72.5
THA.LOC104802293 Tarenaya hassleriana HOM05D003294 ORTHO05D004060 2.7e-51 207.6 134 70.9
ClCG07G016610 Citrullus lanatus HOM05D003294 ORTHO05D004060 1.0e-50 205.7 135 71.1
Migut.G00806 Erythranthe guttata HOM05D003294 ORTHO05D004060 4.0e-50 203.8 136 73.5
Cc03_g11110 Coffea canephora HOM05D003294 ORTHO05D004060 8.8e-50 202.6 146 68.5
Duzib151G0954 Durio zibethinus HOM05D003294 ORTHO05D004060 1.2e-49 202.2 137 70.8
Atru.chr3.1652 Acer truncatum HOM05D003294 ORTHO05D004060 2.6e-49 201.1 135 73.3
THA.LOC104803514 Tarenaya hassleriana HOM05D003294 ORTHO05D004060 2.6e-49 201.1 134 70.1
CsaV3_4G003720 Cucumis sativus L. HOM05D003294 ORTHO05D004060 3.4e-49 200.7 152 65.8
C03p28650 Brassica napus HOM05D003294 ORTHO05D004060 4.4e-49 200.3 137 69.3
BolC3t15227H Brassica oleracea HOM05D003294 ORTHO05D004060 4.4e-49 200.3 137 69.3
Manes.11G114666 Manihot esculenta HOM05D003294 ORTHO05D004060 4.4e-49 200.3 137 69.3
BraA09t40598Z Brassica rapa HOM05D003294 ORTHO05D004060 5.7e-49 199.9 132 69.7
Nn1g09740 Nelumbo nucifera HOM05D003294 ORTHO05D004060 5.7e-49 199.9 132 72.7
Peaxi162Scf00286g00022 Petunia axillaris HOM05D003294 ORTHO05D004060 9.8e-49 199.1 157 65.0
A04p32470 Brassica napus HOM05D003294 ORTHO05D004060 1.3e-48 198.7 132 69.7
A09p51590 Brassica napus HOM05D003294 ORTHO05D004060 1.3e-48 198.7 132 68.9
BcaC07g40319 Brassica carinata HOM05D003294 ORTHO05D004060 1.7e-48 198.4 132 69.7
C08p34360 Brassica napus HOM05D003294 ORTHO05D004060 1.7e-48 198.4 132 69.7
MELO3C000009.2 Cucumis melo HOM05D000068 ORTHO05D000084 1.7e-48 198.4 152 65.1
Thecc.04G182000 Theobroma cacao HOM05D003294 ORTHO05D004060 1.7e-48 198.4 138 70.3
BolC4t22061H Brassica oleracea HOM05D003294 ORTHO05D004060 2.2e-48 198.0 132 69.7
C04p70160 Brassica napus HOM05D003294 ORTHO05D004060 2.8e-48 197.6 132 68.9
BolC4t28519H Brassica oleracea HOM05D003294 ORTHO05D004060 2.8e-48 197.6 132 68.9
A03p24060 Brassica napus HOM05D003294 ORTHO05D004060 3.7e-48 197.2 132 68.9
BraA05t19350Z Brassica rapa HOM05D003294 ORTHO05D004060 3.7e-48 197.2 127 71.7
BolC8t51035H Brassica oleracea HOM05D003294 ORTHO05D004060 4.8e-48 196.8 132 68.9
Aa31LG1G24960 Aethionema arabicum HOM05D003294 ORTHO05D004060 6.3e-48 196.4 132 69.7
Gohir.D09G203900 Gossypium hirsutum HOM05D003294 ORTHO05D004060 6.3e-48 196.4 123 74.8
Sabra02G0176500 Salix brachista HOM05D003294 ORTHO05D004060 6.3e-48 196.4 137 71.5
Potri.014G151101 Populus trichocarpa HOM05D003294 ORTHO05D004060 8.3e-48 196.1 154 66.2
Gorai.006G227800 Gossypium raimondii HOM05D003294 ORTHO05D004060 1.1e-47 195.7 140 68.6
MBI11_g02538_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 1.4e-47 195.3 136 69.9
PGSC0003DMG400002364 Solanum tuberosum HOM05D003294 ORTHO05D004060 1.4e-47 195.3 134 72.4
TAR365G0590 Trochodendron aralioides HOM05D003294 ORTHO05D004060 1.4e-47 195.3 136 68.4
CSS0007766 Camellia sinensis var. sinensis HOM05D003294 ORTHO05D004060 1.8e-47 194.9 136 71.3
Sed0017100 Sechium edule HOM05D003294 ORTHO05D004060 1.8e-47 194.9 135 68.1
Solyc12g098780.2 Solanum lycopersicum HOM05D003294 ORTHO05D004060 1.8e-47 194.9 134 71.6
Gohir.A09G210500 Gossypium hirsutum HOM05D003294 ORTHO05D004060 2.4e-47 194.5 123 74.8
Actinidia17219 Actinidia chinensis HOM05D003294 ORTHO05D004060 3.1e-47 194.1 123 73.2
SpUn1318_0010 Schrenkiella parvula HOM05D003294 ORTHO05D004060 4.1e-47 193.7 129 69.0
PGSC0003DMG400021603 Solanum tuberosum HOM05D003294 ORTHO05D004060 5.4e-47 193.4 136 70.6
CAN.G484.118 Capsicum annuum HOM05D003294 ORTHO05D004060 7.0e-47 193.0 134 70.9
CARHR138220 Cardamine hirsuta HOM05D003294 ORTHO05D004060 7.0e-47 193.0 136 67.6
Sp4g25280 Schrenkiella parvula HOM05D003294 ORTHO05D004060 7.0e-47 193.0 136 66.9
SpUn0921_0020 Schrenkiella parvula HOM05D003294 ORTHO05D004060 7.0e-47 193.0 136 66.9
Sed0006652 Sechium edule HOM05D003294 ORTHO05D004060 7.0e-47 193.0 121 72.7
Solyc12g150132.1 Solanum lycopersicum HOM05D003294 ORTHO05D004060 7.0e-47 193.0 134 70.9
Sopen12g033510 Solanum pennellii HOM05D003294 ORTHO05D004060 7.0e-47 193.0 134 70.9
PGSC0003DMG400004676 Solanum tuberosum HOM05D003294 ORTHO05D004060 9.1e-47 192.6 134 70.1
Potri.002G231250 Populus trichocarpa HOM05D003294 ORTHO05D004060 1.2e-46 192.2 135 70.4
BraA03t11617Z Brassica rapa HOM05D003294 ORTHO05D004060 1.6e-46 191.8 128 69.5
BraA04t18713Z Brassica rapa HOM05D003294 ORTHO05D004060 1.6e-46 191.8 125 71.2
Lj6C64T13 Lonicera japonica HOM05D003294 ORTHO05D004060 2.0e-46 191.4 123 73.2
Cpa.g.sc164.2 Carica papaya HOM05D003294 ORTHO05D004060 2.7e-46 191.0 134 69.4
Duzib268G0989 Durio zibethinus HOM05D003294 ORTHO05D004060 3.5e-46 190.7 154 63.0
Sopen09g036430 Solanum pennellii HOM05D003294 ORTHO05D004060 3.5e-46 190.7 136 69.9
TWI15G0198 Tripterygium wilfordii HOM05D003294 ORTHO05D004060 3.5e-46 190.7 127 71.7
CAN.G484.120 Capsicum annuum HOM05D003294 ORTHO05D004060 5.9e-46 189.9 121 72.7
Sopen12g033520 Solanum pennellii HOM05D003294 ORTHO05D004060 5.9e-46 189.9 134 70.1
Sopen12g033530 Solanum pennellii HOM05D003294 ORTHO05D004060 7.7e-46 189.5 134 69.4
Rhsim09G0035700 Rhododendron simsii HOM05D003294 ORTHO05D004060 1.0e-45 189.1 137 67.9
Sopen12g033540 Solanum pennellii HOM05D003294 ORTHO05D004060 1.3e-45 188.7 134 69.4
Aa31LG10G13630 Aethionema arabicum HOM05D003294 ORTHO05D004060 2.3e-45 188.0 132 65.9
Dinv44225 Davidia involucrata HOM05D003294 ORTHO05D004060 2.3e-45 188.0 114 76.3
Actinidia35892 Actinidia chinensis HOM05D003294 ORTHO05D004060 2.9e-45 187.6 136 66.2
Aqoxy2G04082 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 2.9e-45 187.6 137 66.4
Carub.0555s0001 Capsella rubella HOM05D003294 ORTHO05D004060 2.9e-45 187.6 136 66.2
CAN.G484.121 Capsicum annuum HOM05D003294 ORTHO05D004060 2.9e-45 187.6 134 68.7
Sabra14G0114500 Salix brachista HOM05D003294 ORTHO05D004060 2.9e-45 187.6 153 63.4
Cfa015791 Carpinus fangiana HOM05D003294 ORTHO05D004060 3.8e-45 187.2 137 65.7
Sabra14G0114900 Salix brachista HOM05D003294 ORTHO05D004060 3.8e-45 187.2 153 63.4
Peaxi162Scf00323g00521 Petunia axillaris HOM05D003294 ORTHO05D004060 6.6e-45 186.4 134 67.9
Peaxi162Scf00378g00826 Petunia axillaris HOM05D003294 ORTHO05D004060 8.6e-45 186.0 134 68.7
Peaxi162Scf00378g00827 Petunia axillaris HOM05D003294 ORTHO05D004060 8.6e-45 186.0 134 68.7
Peaxi162Scf00378g00828 Petunia axillaris HOM05D003294 ORTHO05D004060 8.6e-45 186.0 134 68.7
Actinidia35893 Actinidia chinensis HOM05D003294 ORTHO05D004060 1.1e-44 185.7 136 65.4
PGSC0003DMG400004675 Solanum tuberosum HOM05D003294 ORTHO05D004060 1.5e-44 185.3 135 68.9
CAN.G710.61 Capsicum annuum HOM05D003294 ORTHO05D004060 3.3e-44 184.1 136 66.9
Nitab4.5_0011287g0010 Nicotiana tabacum HOM05D003294 ORTHO05D004060 4.2e-44 183.7 135 67.4
CAN.G484.117 Capsicum annuum HOM05D003294 ORTHO05D004060 1.2e-43 182.2 150 63.3
Nitab4.5_0000383g0350 Nicotiana tabacum HOM05D003294 ORTHO05D004060 1.2e-43 182.2 136 66.2
Hund31331 Selenicereus undatus HOM05D003294 ORTHO05D004060 2.8e-43 181.0 136 65.4
Hund31332 Selenicereus undatus HOM05D003294 ORTHO05D004060 2.8e-43 181.0 136 65.4
Solyc12g150131.1 Solanum lycopersicum HOM05D003294 ORTHO05D004060 2.8e-43 181.0 135 66.7
Sopen12g033500 Solanum pennellii HOM05D003294 ORTHO05D004060 3.6e-43 180.6 135 68.1
CiPaw.01G105500 Carya illinoinensis HOM05D003294 ORTHO05D004060 6.1e-43 179.9 140 65.7
DCAR_023908 Daucus carota HOM05D003294 ORTHO05D004060 8.0e-43 179.5 138 65.9
Nitab4.5_0000383g0230 Nicotiana tabacum HOM05D003294 ORTHO05D004060 1.0e-42 179.1 136 66.2
MBI08_g05500_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 1.8e-42 178.3 136 64.0
HanXRQChr03g0075661 Helianthus annuus HOM05D003294 ORTHO05D004060 3.0e-42 177.6 138 64.5
QL10p046489 Quercus lobata HOM05D003294 ORTHO05D004060 4.0e-42 177.2 127 65.4
Lj6A66G18 Lonicera japonica HOM05D003294 ORTHO05D004060 5.2e-42 176.8 142 64.1
Lju521A1G13 Lonicera japonica HOM05D003294 ORTHO05D004060 5.2e-42 176.8 142 64.1
MBI08_g05491_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 5.2e-42 176.8 123 66.7
PSO017G7143 Papaver somniferum HOM05D003294 ORTHO05D004060 5.2e-42 176.8 126 65.9
FAN17G2242 Fragaria x ananassa HOM05D003294 ORTHO05D004060 6.8e-42 176.4 137 62.8
FvH4_4g11660 Fragaria vesca HOM05D003294 ORTHO05D004060 8.9e-42 176.0 137 62.0
FAN12G0818 Fragaria x ananassa HOM05D003294 ORTHO05D004060 8.9e-42 176.0 137 62.0
FAN12G1447 Fragaria x ananassa HOM05D003294 ORTHO05D004060 8.9e-42 176.0 137 62.0
MSTRG.24590 Avicennia marina HOM05D003294 ORTHO05D004060 1.2e-41 175.6 137 64.2
MBI08_g20550_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 2.6e-41 174.5 137 62.8
Peaxi162Scf00323g00618 Petunia axillaris HOM05D003294 ORTHO05D004060 2.6e-41 174.5 154 59.7
MBI08_g05488_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 3.4e-41 174.1 137 61.3
HanXRQChr14g0437091 Helianthus annuus HOM05D003294 ORTHO05D004060 5.7e-41 173.3 153 62.1
TPR.G36208 Trifolium pratense HOM05D003294 ORTHO05D004060 7.5e-41 172.9 135 66.7
FAN22G1863 Fragaria x ananassa HOM05D003294 ORTHO05D004060 1.3e-40 172.2 134 61.9
VMungo1383G0624 Vigna mungo HOM05D003294 ORTHO05D004060 1.3e-40 172.2 137 62.8
Nitab4.5_0020026g0010 Nicotiana tabacum HOM05D003294 ORTHO05D004060 2.8e-40 171.0 112 67.9
ECA238G3164 Erigeron canadensis HOM05D003294 ORTHO05D004060 3.7e-40 170.6 155 60.6
Gohir.D02G014550 Gossypium hirsutum HOM05D003294 ORTHO05D004060 3.7e-40 170.6 135 61.5
TPR.G40851 Trifolium pratense HOM05D003294 ORTHO05D004060 3.7e-40 170.6 135 65.9
FAN07G0287 Fragaria x ananassa HOM05D003294 ORTHO05D004060 6.3e-40 169.9 136 61.0
Psat6g050240 Pisum sativum HOM05D003294 ORTHO05D004060 6.3e-40 169.9 134 66.4
unitig_744.g24077 Utricularia gibba HOM05D003294 ORTHO05D004060 6.3e-40 169.9 137 58.4
Gohir.A02G013500 Gossypium hirsutum HOM05D003294 ORTHO05D004060 1.1e-39 169.1 135 60.7
Gorai.005G018000 Gossypium raimondii HOM05D003294 ORTHO05D004060 1.8e-39 168.3 135 60.7
arahy.Tifrunner.gnm1.ann1.NU92WK Arachis hypogaea HOM05D003294 ORTHO05D004060 3.1e-39 167.5 137 62.8
Medtr1g033080 Medicago truncatula HOM05D003294 ORTHO05D004060 1.2e-38 165.6 134 64.2
PSO675G6401 Papaver somniferum HOM05D003294 ORTHO05D004060 1.2e-38 165.6 137 59.9
Sopen12g018920 Solanum pennellii HOM05D003294 ORTHO05D004060 1.2e-38 165.6 135 63.7
Phvul.007G084600 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 1.6e-38 165.2 137 63.5
Phvul.007G002400 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 2.0e-38 164.9 136 64.7
Ca_13008_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 4.5e-38 163.7 118 68.6
Lj5g0001019 Lotus japonicus HOM05D003294 ORTHO05D004060 4.5e-38 163.7 137 61.3
Medtr1g033130 Medicago truncatula HOM05D003294 ORTHO05D004060 4.5e-38 163.7 135 62.2
CARHR169650 Cardamine hirsuta HOM05D003294 ORTHO05D004060 5.9e-38 163.3 110 70.0
ATR0743G132 Amborella trichopoda HOM05D003294 ORTHO05D004060 7.8e-38 162.9 124 62.1
unitig_578.g16248 Utricularia gibba HOM05D003294 ORTHO05D004060 7.8e-38 162.9 136 56.6
Phvul.008G003200 Phaseolus vulgaris HOM05D003294 ORTHO05D004060 1.3e-37 162.2 134 60.4
Glyma.20G247850 Glycine max HOM05D003294 ORTHO05D004060 1.7e-37 161.8 154 58.4
Lsat_1_v5_gn_2_51461 Lactuca sativa HOM05D003294 ORTHO05D004060 1.7e-37 161.8 125 64.8
Lsat_1_v5_gn_2_51640 Lactuca sativa HOM05D003294 ORTHO05D004060 1.7e-37 161.8 125 64.0
Psat0s2492g0040 Pisum sativum HOM05D003294 ORTHO05D004060 1.7e-37 161.8 136 61.8
BcaC01g05257 Brassica carinata HOM05D003294 ORTHO05D004060 2.3e-37 161.4 97 72.2
Medtr1g116947 Medicago truncatula HOM05D003294 ORTHO05D004060 3.8e-37 160.6 136 61.0
VMungo0720G0780 Vigna mungo HOM05D003294 ORTHO05D004060 5.0e-37 160.2 155 58.7
arahy.Tifrunner.gnm1.ann1.XI0QBF Arachis hypogaea HOM05D003294 ORTHO05D004060 6.6e-37 159.8 147 58.5
Lsat_1_v5_gn_2_51341 Lactuca sativa HOM05D003294 ORTHO05D004060 1.5e-36 158.7 141 59.6
arahy.Tifrunner.gnm1.ann1.F7AR35 Arachis hypogaea HOM05D003294 ORTHO05D004060 3.3e-36 157.5 171 53.8
arahy.Tifrunner.gnm1.ann1.U0YEJU Arachis hypogaea HOM05D003294 ORTHO05D004060 3.3e-36 157.5 171 53.8
Lalb_Chr02g0144471 Lupinus albus HOM05D003294 ORTHO05D004060 3.3e-36 157.5 134 61.9
Nitab4.5_0001049g0140 Nicotiana tabacum HOM05D003294 ORTHO05D004060 3.3e-36 157.5 113 70.8
BcaB01g03408 Brassica carinata HOM05D003294 ORTHO05D004060 4.3e-36 157.1 94 75.5
Ca_13010_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 4.3e-36 157.1 118 66.9
Lj6g0023787 Lotus japonicus HOM05D003294 ORTHO05D004060 4.3e-36 157.1 132 61.4
Lj2g0020269 Lotus japonicus HOM05D003294 ORTHO05D004060 2.1e-35 154.8 137 61.3
Nn7g38030 Nelumbo nucifera HOM05D003294 ORTHO05D004060 2.8e-35 154.5 135 54.8
Ca_13009_v3 Cicer arietinum L. HOM05D003294 ORTHO05D004060 3.6e-35 154.1 118 66.1
Lsat_1_v5_gn_2_50521 Lactuca sativa HOM05D003294 ORTHO05D004060 8.0e-35 152.9 140 57.9
Peaxi162Scf00323g00616 Petunia axillaris HOM05D003294 ORTHO05D004060 8.0e-35 152.9 124 62.9
Nitab4.5_0004568g0020 Nicotiana tabacum HOM05D003294 ORTHO05D004060 1.8e-34 151.8 119 67.2
PSO017G4822 Papaver somniferum HOM05D003294 ORTHO05D004060 1.8e-34 151.8 120 61.7
Psat0s3952g0120 Pisum sativum HOM05D003294 ORTHO05D004060 6.4e-32 143.3 137 57.7
Haze_00702 Corylus avellana HOM05D003294 ORTHO05D004060 8.3e-32 142.9 95 71.6
Peaxi162Scf00323g00620 Petunia axillaris HOM05D003294 ORTHO05D004060 1.9e-31 141.7 113 59.3
Hund06534 Selenicereus undatus HOM05D003294 ORTHO05D004060 4.1e-31 140.6 126 55.6
HanXRQChr14g0437071 Helianthus annuus HOM05D003294 ORTHO05D004060 1.0e-29 136.0 121 59.5
TPR.G6490 Trifolium pratense HOM05D003294 ORTHO05D004060 1.0e-29 136.0 116 65.5
Sc10g0006170 Simmondsia chinensis HOM05D003294 ORTHO05D004060 3.9e-29 134.0 106 60.4
Medtr1g033100 Medicago truncatula HOM05D003294 ORTHO05D004060 6.6e-29 133.3 117 62.4
RcHm_v2.0_Chr4g0408821 Rosa chinensis HOM05D003294 ORTHO05D004060 1.6e-27 128.6 103 62.1
vmacro00571 Vaccinium macrocarpon HOM05D003294 ORTHO05D004060 3.6e-27 127.5 103 54.4
SEGI_35656 Sequoiadendron giganteum HOM05D003294 ORTHO05D004060 1.8e-26 125.2 128 46.9
Dinv22670 Davidia involucrata HOM05D003294 ORTHO05D004060 2.0e-25 121.7 107 58.9
PSO478G2289 Papaver somniferum HOM05D003294 ORTHO05D004060 2.0e-25 121.7 124 50.0
arahy.Tifrunner.gnm1.ann1.3MFN7L Arachis hypogaea HOM05D003294 ORTHO05D004060 7.5e-25 119.8 109 58.7
Lalb_Chr21g0307691 Lupinus albus HOM05D003294 ORTHO05D004060 1.7e-24 118.6 103 59.2
arahy.Tifrunner.gnm1.ann1.067A10 Arachis hypogaea HOM05D003294 ORTHO05D004060 6.4e-24 116.7 109 57.8
arahy.Tifrunner.gnm1.ann1.MNWX4W Arachis hypogaea HOM05D003294 ORTHO05D004060 7.8e-22 109.8 93 61.3
arahy.Tifrunner.gnm1.ann1.U55V76 Arachis hypogaea HOM05D003294 ORTHO05D004060 1.3e-21 109.0 93 61.3
arahy.Tifrunner.gnm1.ann1.AM9QWL Arachis hypogaea HOM05D003294 ORTHO05D004060 1.7e-21 108.6 97 57.7
Nitab4.5_0000978g0120 Nicotiana tabacum HOM05D003294 ORTHO05D004060 6.6e-21 106.7 120 46.7
Os01g0899700 Oryza sativa ssp. japonica HOM05D003294 ORTHO05D004060 3.6e-19 100.9 124 41.1
Zm00001eb144520 Zea mays HOM05D003294 ORTHO05D004060 2.3e-18 98.2 144 40.3
Psat0s3952g0080 Pisum sativum HOM05D003294 ORTHO05D004060 1.5e-17 95.5 156 42.3
Lj2g0025231 Lotus japonicus HOM05D003294 ORTHO05D004060 1.1e-12 79.3 54 66.7
Aqoxy1G02134 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 5.6e-12 77.0 67 58.2
Solyc12g038700.1 Solanum lycopersicum HOM05D003294 ORTHO05D004060 9.5e-12 76.3 45 75.6
MBI11_g33754_MAGBIO Magnolia biondii HOM05D003294 ORTHO05D004060 2.8e-11 74.7 93 46.2
Aqoxy7G03524 Aquilegia oxysepala HOM05D003294 ORTHO05D004060 5.8e-09 67.0 105 41.0
Lj2g0020959 Lotus japonicus HOM05D003294 ORTHO05D004060 1.7e-08 65.5 71 57.7


User provided reference genes

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