Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 3.8e-70 268.1 139 100.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.7e-54 216.1 150 75.3
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.0e-54 214.5 150 74.7
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.3e-51 205.7 150 72.0
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.3e-51 205.7 150 72.0
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 7.3e-45 184.1 108 84.3
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.4e-43 179.9 150 60.0
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 1.4e-43 179.9 150 61.3
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 6.8e-43 177.6 150 60.0
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 8.9e-43 177.2 150 59.3
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 2.0e-42 176.0 151 60.9
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 1.3e-41 173.3 150 58.7
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.3e-41 173.3 150 59.3
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 1.7e-41 172.9 150 60.7
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 2.9e-41 172.2 150 60.0
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 4.9e-41 171.4 150 56.0
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 4.9e-41 171.4 150 58.7
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 8.3e-41 170.6 150 59.3
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 1.1e-40 170.2 150 58.7
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.4e-40 169.9 150 60.0
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 1.4e-40 169.9 150 60.0
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.4e-40 169.9 150 56.7
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 4.1e-40 168.3 150 58.0
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 4.1e-40 168.3 150 59.3
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 5.4e-40 167.9 150 58.7
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 5.4e-40 167.9 150 58.7
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 9.2e-40 167.2 150 58.0
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 1.2e-39 166.8 150 58.0
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-39 166.4 158 56.3
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 2.0e-39 166.0 150 55.3
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 2.7e-39 165.6 150 61.3
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 2.7e-39 165.6 150 55.3
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 4.6e-39 164.9 150 57.3
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 6.0e-39 164.5 150 55.3
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 7.8e-39 164.1 142 61.3
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 2.3e-38 162.5 150 56.0
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 2.3e-38 162.5 150 56.7
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 2.3e-38 162.5 150 56.7
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 3.0e-38 162.2 150 56.7
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 3.9e-38 161.8 150 56.0
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 3.9e-38 161.8 159 54.7
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 5.0e-38 161.4 150 56.0
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 6.6e-38 161.0 150 55.3
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 8.6e-38 160.6 150 56.0
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 1.9e-37 159.5 150 53.3
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 1.9e-37 159.5 150 53.3
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 7.3e-37 157.5 139 60.4
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 1.2e-36 156.8 148 53.4
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 1.2e-36 156.8 148 52.0
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 1.6e-36 156.4 148 52.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 1.6e-36 156.4 148 52.7
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 1.6e-36 156.4 150 55.3
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 2.1e-36 156.0 152 53.3
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 6.2e-36 154.5 148 52.7
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 6.2e-36 154.5 148 52.7
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 8.1e-36 154.1 150 52.7
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 5.2e-35 151.4 148 52.0
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 8.9e-35 150.6 151 52.3
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 8.9e-35 150.6 151 52.3
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 1.2e-34 150.2 150 50.0
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 2.0e-34 149.4 148 53.4
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 2.6e-34 149.1 134 59.0
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 3.4e-34 148.7 148 52.7
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 3.4e-34 148.7 150 52.0
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 4.4e-34 148.3 195 44.1
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 1.7e-33 146.4 150 52.7
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 4.1e-32 141.7 148 50.7
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 5.4e-32 141.4 148 50.0
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 1.6e-31 139.8 148 49.3
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.6e-31 139.8 150 50.7
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 4.6e-31 138.3 224 37.1
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 7.8e-31 137.5 131 56.5
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.0e-30 137.1 150 50.0
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 1.7e-30 136.3 163 46.0
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 2.3e-30 136.0 131 55.7
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 3.0e-30 135.6 163 46.0
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 3.0e-30 135.6 163 46.0
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 1.1e-29 133.7 139 52.5
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.1e-29 133.7 120 60.8
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 3.3e-29 132.1 120 60.0
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 9.5e-29 130.6 137 52.6
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 4.7e-28 128.3 130 53.8
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 6.2e-28 127.9 119 58.8
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 1.1e-27 127.1 147 48.3
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 5.2e-27 124.8 122 55.7
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 3.4e-26 122.1 152 43.4
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 4.4e-26 121.7 152 43.4
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 9.9e-26 120.6 134 48.5
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 1.3e-25 120.2 135 51.1
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.2e-25 119.4 152 42.8
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 2.9e-25 119.0 127 47.2
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 6.4e-25 117.9 98 53.1
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.9e-24 116.3 88 62.5
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.9e-24 116.3 150 42.7
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.9e-24 116.3 150 44.0
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 2.4e-24 115.9 118 52.5
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 7.1e-24 114.4 144 44.4
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 2.1e-23 112.8 109 59.6
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 7.8e-23 110.9 98 53.1
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 4.3e-21 105.1 120 55.0
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 1.6e-20 103.2 121 44.6
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 2.4e-19 99.4 152 39.5
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 2.4e-19 99.4 152 39.5
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 2.6e-18 95.9 113 52.2
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 8.4e-17 90.9 81 51.9
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 5.4e-16 88.2 92 57.6
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 7.1e-16 87.8 147 36.7
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 9.3e-16 87.4 94 56.4
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 4.6e-15 85.1 75 48.0
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 4.6e-15 85.1 75 48.0
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 7.8e-15 84.3 80 47.5
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 2.3e-14 82.8 149 37.6
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 1.1e-13 80.5 89 51.7
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.3e-13 78.6 65 70.8
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 6.2e-12 74.7 146 34.2
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 2.4e-11 72.8 146 33.6
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.3e-09 67.0 60 66.7
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.7e-09 66.6 237 29.5
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 2.2e-09 66.2 53 67.9
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 6.4e-09 64.7 53 69.8
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 1.1e-08 63.9 108 45.4
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.4e-08 63.5 53 67.9
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.4e-08 63.5 53 67.9
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 5.4e-08 61.6 53 64.2
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 7.1e-08 61.2 53 67.9
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 9.3e-08 60.8 47 68.1
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 3.5e-07 58.9 72 52.8
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 4.6e-07 58.5 56 58.9
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 1.7e-06 56.6 76 48.7


User provided reference genes

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