Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold400G50927 Striga asiatica HOM05D004537 ORTHO05D005492 1.6e-205 719.2 353 100.0
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 1.1e-118 430.6 262 84.0
SalBow8G0065 Salvia bowleyana HOM05D047022 ORTHO05D005492 3.4e-115 419.1 237 87.3
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 2.9e-66 256.5 343 49.3
SalBow1G2743 Salvia bowleyana HOM05D004537 ORTHO05D005492 6.8e-55 218.8 259 50.6
SalBow8G1414 Salvia bowleyana HOM05D047022 ORTHO05D005492 1.9e-49 200.7 204 56.9
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 9.5e-49 198.4 94 98.9
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 2.3e-47 193.7 94 96.8
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 3.0e-47 193.4 94 96.8
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 4.0e-47 193.0 93 96.8
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.2e-47 192.6 94 96.8
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 8.9e-47 191.8 93 96.8
Nn003s41396 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.9e-47 191.8 94 96.8
Nn1g09964 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.9e-47 191.8 94 96.8
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.9e-47 191.8 94 96.8
Nn1g10125 Nelumbo nucifera HOM05D004537 ORTHO05D005492 8.9e-47 191.8 94 96.8
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.5e-46 191.0 93 95.7
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 1.5e-46 191.0 94 96.8
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 3.4e-46 189.9 94 95.7
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 3.4e-46 189.9 94 95.7
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 3.4e-46 189.9 94 95.7
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 3.4e-46 189.9 94 95.7
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.4e-46 189.9 94 93.6
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 7.5e-46 188.7 94 95.7
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 9.8e-46 188.3 94 92.6
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.3e-45 188.0 91 95.6
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 2.8e-45 186.8 94 94.7
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 1.1e-44 184.9 94 92.6
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 1.1e-44 184.9 94 94.7
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 1.1e-44 184.9 94 94.7
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 1.4e-44 184.5 93 94.6
HanXRQChr04g0127211 Helianthus annuus HOM05D004537 ORTHO05D005492 2.4e-44 183.7 94 93.6
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 4.1e-44 183.0 94 93.6
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 2.0e-43 180.6 90 95.6
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
CARHR288190 Cardamine hirsuta HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 2.7e-43 180.3 94 91.5
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 4.5e-43 179.5 90 94.4
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 5.9e-43 179.1 90 93.3
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 5.9e-43 179.1 90 93.3
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 5.9e-43 179.1 93 92.5
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 7.8e-43 178.7 91 90.1
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 1.0e-42 178.3 94 90.4
RcHm_v2.0_MTg0498781 Rosa chinensis HOM05D004537 ORTHO05D005492 1.0e-42 178.3 94 90.4
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.7e-42 177.6 90 92.2
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 2.3e-42 177.2 93 89.2
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 5.0e-42 176.0 90 92.2
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.0e-42 176.0 94 88.3
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 6.6e-42 175.6 90 92.2
Aa31csc464G10 Aethionema arabicum HOM05D004537 ORTHO05D005492 1.1e-41 174.9 91 91.2
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 2.5e-41 173.7 93 90.3
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.4e-39 167.9 94 88.3
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.4e-39 167.9 94 88.3
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 1.4e-39 167.9 94 88.3
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 1.4e-39 167.9 94 88.3
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 1.8e-39 167.5 93 88.2
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 3.0e-39 166.8 94 87.2
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.0e-39 166.4 94 87.2
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 1.2e-38 164.9 94 86.2
Lsat_1_v5_gn_8_134521 Lactuca sativa HOM05D004537 ORTHO05D005492 2.9e-37 160.2 94 83.0
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 8.3e-37 158.7 84 91.7
Lsat_1_v5_gn_4_114400 Lactuca sativa HOM05D004537 ORTHO05D005492 5.4e-36 156.0 89 84.3
SHI36146 Sapria himalayana HOM05D004537 ORTHO05D005492 7.0e-36 155.6 85 88.2
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 1.7e-34 151.0 135 57.8
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 1.5e-33 147.9 90 82.2
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 4.3e-33 146.4 83 86.7
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 9.8e-30 135.2 64 98.4
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 9.8e-30 135.2 79 79.7
AUR62044038 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.2e-29 134.0 70 88.6
BraSC48t46324Z Brassica rapa HOM05D004537 ORTHO05D005492 2.4e-28 130.6 71 88.7
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 3.2e-28 130.2 67 91.0
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 3.2e-28 130.2 88 75.0
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 6.6e-26 122.5 74 82.4
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.5e-25 120.6 77 79.2
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 4.3e-25 119.8 69 85.5
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 6.2e-24 115.9 60 88.3
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.3e-23 114.0 79 70.9
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 2.3e-23 114.0 79 70.9
SHI27475 Sapria himalayana HOM05D004537 ORTHO05D005492 4.4e-22 109.8 86 65.1
CAN.G1103.8 Capsicum annuum HOM05D004537 ORTHO05D005492 1.3e-21 108.2 62 83.9
CAN.G416.37 Capsicum annuum HOM05D004537 ORTHO05D005492 6.0e-19 99.4 56 82.1
SHI30018 Sapria himalayana HOM05D004537 ORTHO05D005492 9.2e-12 75.5 181 33.7
HanXRQChr05g0159721 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-10 71.6 43 79.1
SHI20135 Sapria himalayana HOM05D004537 ORTHO05D005492 1.3e-10 71.6 68 52.9
TPR.G9938 Trifolium pratense HOM05D004537 ORTHO05D005492 3.9e-10 70.1 46 76.1
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 9.9e-06 55.5 26 84.6


User provided reference genes

Program Settings