Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 5.3e-110 401.0 194 100.0
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.2e-37 160.6 158 52.5
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 5.0e-36 155.2 172 48.3
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 4.0e-33 145.6 161 42.9
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 1.2e-32 144.1 155 48.4
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 2.9e-31 139.4 129 51.9
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 3.7e-31 139.0 159 45.3
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-29 132.1 129 51.2
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-29 132.1 129 51.2
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 4.6e-29 132.1 129 51.2
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 5.6e-27 125.2 144 45.8
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 6.2e-26 121.7 100 60.0
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 8.9e-25 117.9 129 46.5
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 3.8e-23 112.5 120 46.7
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 3.8e-23 112.5 120 46.7
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 4.9e-23 112.1 125 51.2
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.4e-22 110.5 151 41.7
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 2.4e-22 109.8 96 55.2
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 4.1e-22 109.0 136 45.6
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 1.2e-21 107.5 97 56.7
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.7e-21 106.3 113 46.9
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 3.5e-21 105.9 87 59.8
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 3.5e-21 105.9 87 59.8
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.5e-21 105.9 87 59.8
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.5e-21 105.9 120 43.3
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.3e-20 104.0 96 53.1
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 3.9e-20 102.4 111 45.9
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.1e-20 102.1 95 50.5
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 8.6e-20 101.3 108 48.1
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 1.1e-19 100.9 122 49.2
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.6e-18 97.1 81 60.5
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 2.8e-18 96.3 108 44.4
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 5.2e-17 92.0 102 45.1
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 2.6e-16 89.7 94 47.9
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.4e-16 89.0 84 51.2
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 5.8e-16 88.6 86 53.5
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 2.9e-15 86.3 88 50.0
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 6.4e-15 85.1 94 50.0
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 3.2e-14 82.8 85 49.4
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 3.5e-13 79.3 86 47.7
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-12 77.0 66 57.6
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-12 77.0 66 57.6
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 3.0e-12 76.3 87 40.2
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 3.9e-12 75.9 58 62.1
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.1e-11 74.3 56 60.7
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.9e-11 73.6 58 58.6
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 1.1e-09 67.8 84 42.9
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 1.1e-09 67.8 55 58.2
SGA_v2.0_scaffold420G51422 Striga asiatica HOM05D002660 ORTHO05D019448 1.8e-09 67.0 60 55.0
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 2.4e-09 66.6 78 46.2
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 5.3e-09 65.5 47 59.6
SGA_v2.0_scaffold479G52276 Striga asiatica HOM05D002660 ORTHO05D003902 5.3e-09 65.5 51 64.7
arahy.Tifrunner.gnm1.ann1.FFDS4S Arachis hypogaea HOM05D002660 ORTHO05D003902 9.0e-09 64.7 91 41.8
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 5.8e-08 62.0 71 45.1
Psat1g132480 Pisum sativum HOM05D030242 ORTHO05D030475 5.8e-08 62.0 62 46.8
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 1.7e-07 60.5 60 50.0
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 1.7e-07 60.5 71 42.3
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 2.2e-07 60.1 60 50.0
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 3.8e-07 59.3 74 41.9
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 4.9e-07 58.9 40 65.0
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 4.9e-07 58.9 51 54.9
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 4.9e-07 58.9 51 54.9
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 6.4e-07 58.5 56 55.4
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-06 57.8 90 38.9
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 3.2e-06 56.2 44 59.1
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 4.2e-06 55.8 60 46.7
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 5.4e-06 55.5 56 53.6
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 7.1e-06 55.1 68 41.2
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 7.1e-06 55.1 101 37.6
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 9.3e-06 54.7 171 28.7
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 9.3e-06 54.7 182 28.0


User provided reference genes

Program Settings