Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 1.4e-122 443.4 295 100.0
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.2e-102 377.1 296 91.6
SGA_v2.0_scaffold225G43014 Striga asiatica HOM05D006481 ORTHO05D008160 3.9e-80 302.4 220 99.5
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 2.6e-31 140.2 313 40.6
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 4.1e-21 106.3 369 36.9
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 4.1e-21 106.3 200 42.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 1.3e-19 101.3 375 30.4
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 2.9e-19 100.1 379 31.4
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.9e-18 97.4 155 47.7
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 4.2e-18 96.3 291 38.5
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 5.5e-18 95.9 95 56.8
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 1.6e-17 94.4 323 46.1
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 2.1e-17 94.0 97 59.8
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 6.1e-17 92.4 341 31.7
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 1.4e-16 91.3 324 37.0
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.4e-16 91.3 99 57.6
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.4e-16 91.3 432 26.9
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 1.8e-16 90.9 291 30.9
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 2.3e-16 90.5 331 31.7
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 3.0e-16 90.1 91 58.2
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 5.2e-16 89.4 288 33.3
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 6.8e-16 89.0 95 56.8
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 8.8e-16 88.6 376 28.5
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 4.4e-15 86.3 183 41.5
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 5.7e-15 85.9 314 31.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 5.7e-15 85.9 192 42.2
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 7.5e-15 85.5 350 30.6
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 7.5e-15 85.5 110 46.4
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 7.5e-15 85.5 228 35.1
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 9.7e-15 85.1 94 55.3
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 1.3e-14 84.7 93 53.8
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.3e-14 84.7 91 56.0
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 9.1e-13 78.6 230 35.7
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 5.9e-12 75.9 62 62.9
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 2.2e-11 73.9 307 27.7
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.9e-11 73.6 385 27.8
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 5.0e-11 72.8 185 35.1
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 6.5e-11 72.4 168 40.5
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 8.5e-11 72.0 385 27.0
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 8.5e-11 72.0 386 27.7
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 8.5e-11 72.0 64 59.4
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 1.1e-10 71.6 326 28.5
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.1e-10 71.6 178 38.8
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 1.1e-10 71.6 63 63.5
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 1.5e-10 71.2 388 28.9
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.5e-10 71.2 72 55.6
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.5e-10 71.2 64 59.4
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 1.5e-10 71.2 285 28.8
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 5.5e-10 69.3 63 55.6
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 7.2e-10 68.9 121 43.0
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 2.7e-09 67.0 311 27.0
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 2.7e-09 67.0 58 63.8
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.6e-09 66.6 62 59.7
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 4.7e-09 66.2 61 60.7
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 4.7e-09 66.2 59 57.6
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 4.7e-09 66.2 55 61.8
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 1.0e-08 65.1 56 64.3
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.0e-08 65.1 61 54.1
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.0e-08 65.1 61 54.1
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.0e-08 65.1 61 54.1
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 2.3e-08 63.9 309 27.5
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.3e-08 63.9 61 52.5
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 5.2e-08 62.8 51 64.7
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 5.2e-08 62.8 51 64.7
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 6.8e-08 62.4 205 30.2
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.2e-07 61.6 337 27.0
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 2.6e-07 60.5 347 38.6
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 4.4e-07 59.7 214 29.4
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 9.8e-07 58.5 356 36.2
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 1.3e-06 58.2 364 33.0
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 1.7e-06 57.8 291 25.4
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.2e-06 57.4 41 63.4
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 2.2e-06 57.4 45 57.8
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 2.8e-06 57.0 384 24.7


User provided reference genes

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