Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01692 Striga asiatica HOM05D001383 ORTHO05D000309 6.3e-188 660.6 329 100.0
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 6.1e-50 202.2 262 46.2
SGA_v2.0_scaffold2426G54118 Striga asiatica HOM05D001383 ORTHO05D000309 6.8e-41 172.2 118 72.9
SGA_v2.0_scaffold102G29873 Striga asiatica HOM05D001383 ORTHO05D000309 2.0e-40 170.6 118 72.9
SGA_v2.0_scaffold102G29875 Striga asiatica HOM05D001383 ORTHO05D000309 7.5e-40 168.7 121 70.2
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-33 147.9 119 63.9
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 4.0e-33 146.4 119 63.0
SGA_v2.0_scaffold10G05216 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-30 137.9 118 61.0
SGA_v2.0_scaffold13G06336 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-30 137.9 118 61.0
SGA_v2.0_scaffold54G19529 Striga asiatica HOM05D001383 ORTHO05D000309 8.0e-26 122.1 118 55.9
SGA_v2.0_scaffold265G46125 Striga asiatica HOM05D038276 ORTHO05D000309 3.5e-13 80.1 58 72.4
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-11 72.8 59 49.2
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-11 72.8 59 49.2
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 2.8e-10 70.5 82 48.8
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 4.7e-10 69.7 65 55.4
DCAR_028751 Daucus carota HOM05D001383 ORTHO05D000309 6.2e-10 69.3 87 43.7
SGA_v2.0_scaffold46G17446 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-09 68.6 71 47.9
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 1.4e-09 68.2 65 55.4
SGA_v2.0_scaffold12G06232 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-09 68.2 71 47.9
Lsat_1_v5_gn_8_76301 Lactuca sativa HOM05D001383 ORTHO05D000309 2.3e-09 67.4 64 53.1
Lsat_1_v5_gn_0_40601 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
Lsat_1_v5_gn_6_94861 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
Lsat_1_v5_gn_8_76981 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
Lsat_1_v5_gn_9_105340 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
Lsat_1_v5_gn_9_111881 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
Lsat_1_v5_gn_9_96521 Lactuca sativa HOM05D001383 ORTHO05D000309 3.1e-09 67.0 64 53.1
SGA_v2.0_scaffold79G25662 Striga asiatica HOM05D001383 ORTHO05D000309 3.1e-09 67.0 77 45.5
Lsat_1_v5_gn_3_44981 Lactuca sativa HOM05D001383 ORTHO05D000309 4.0e-09 66.6 72 47.2
Lsat_1_v5_gn_4_67121 Lactuca sativa HOM05D001383 ORTHO05D000309 4.0e-09 66.6 72 47.2
SGA_v2.0_scaffold158G37467 Striga asiatica HOM05D008771 ORTHO05D010664 4.0e-09 66.6 84 40.5
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.2e-09 66.2 84 41.7
DCAR_029049 Daucus carota HOM05D001383 ORTHO05D000309 6.8e-09 65.9 68 47.1
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.8e-09 65.9 67 43.3
Lsat_1_v5_gn_1_7320 Lactuca sativa HOM05D001383 ORTHO05D000309 6.8e-09 65.9 64 51.6
Lsat_1_v5_gn_4_141301 Lactuca sativa HOM05D001383 ORTHO05D000309 6.8e-09 65.9 72 47.2
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 8.9e-09 65.5 66 47.0
Lsat_1_v5_gn_1_121661 Lactuca sativa HOM05D001383 ORTHO05D000309 8.9e-09 65.5 60 53.3
Lsat_1_v5_gn_4_25260 Lactuca sativa HOM05D001383 ORTHO05D000309 8.9e-09 65.5 64 51.6
Lsat_1_v5_gn_4_26020 Lactuca sativa HOM05D001383 ORTHO05D000309 8.9e-09 65.5 64 51.6
Lsat_1_v5_gn_4_176701 Lactuca sativa HOM05D001383 ORTHO05D000309 1.2e-08 65.1 63 49.2
SGA_v2.0_scaffold57G20130 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-08 65.1 61 49.2
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 1.5e-08 64.7 74 47.3
DCAR_031437 Daucus carota HOM05D001383 ORTHO05D000309 2.0e-08 64.3 84 46.4
HanXRQChr14g0440841 Helianthus annuus HOM05D001383 ORTHO05D000309 2.0e-08 64.3 65 50.8
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.0e-08 64.3 67 41.8
Hma1.2p1_0185F.1_g081420 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.0e-08 64.3 63 44.4
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 2.0e-08 64.3 97 40.2
CANSAT80G0185 Cannabis sativa HOM05D001383 ORTHO05D000309 2.6e-08 63.9 63 47.6
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.6e-08 63.9 63 42.9
SGA_v2.0_scaffold38G15080 Striga asiatica HOM05D001383 ORTHO05D000309 2.6e-08 63.9 101 34.7
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.6e-08 63.9 65 46.2
CANSAT25G0977 Cannabis sativa HOM05D001383 ORTHO05D000309 3.4e-08 63.5 63 47.6
Lsat_1_v5_gn_5_119041 Lactuca sativa HOM05D001383 ORTHO05D000309 3.4e-08 63.5 61 50.8
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.4e-08 63.2 63 46.0
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.4e-08 63.2 63 46.0
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 4.4e-08 63.2 64 51.6
SGA_v2.0_scaffold3G01609 Striga asiatica HOM05D001383 ORTHO05D000309 4.4e-08 63.2 73 39.7
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.4e-08 63.2 70 42.9
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 5.8e-08 62.8 69 46.4
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 5.8e-08 62.8 69 42.0
SGA_v2.0_scaffold29G12301 Striga asiatica HOM05D001383 ORTHO05D000309 5.8e-08 62.8 100 35.0
vmacro00770 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.8e-08 62.8 75 41.3
DCAR_017406 Daucus carota HOM05D001383 ORTHO05D000309 7.5e-08 62.4 77 42.9
ECA238G1062 Erigeron canadensis HOM05D001383 ORTHO05D000309 7.5e-08 62.4 68 44.1
Gohir.A01G201950 Gossypium hirsutum HOM05D001383 ORTHO05D000309 7.5e-08 62.4 65 43.1
vmacro21229 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 7.5e-08 62.4 65 44.6
DCAR_015412 Daucus carota HOM05D001383 ORTHO05D000309 9.9e-08 62.0 81 37.0
Gohir.A10G176350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 9.9e-08 62.0 71 42.3
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 9.9e-08 62.0 151 33.1
SGA_v2.0_scaffold472G52098 Striga asiatica HOM05D001383 ORTHO05D000309 9.9e-08 62.0 100 35.0
DCAR_026902 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-07 61.6 78 46.2
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 1.3e-07 61.6 66 45.5
Hma1.2p1_0787F.1_g217983 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-07 61.6 63 41.3
Hma1.2p1_1793F.1_g302610 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-07 61.6 59 49.2
SGA_v2.0_scaffold27G11592 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 61.6 61 50.8
SGA_v2.0_scaffold43G16251 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 61.6 100 35.0
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 61.6 63 47.6
SGA_v2.0_scaffold5G03034 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 61.6 100 35.0
vmacro21961 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.3e-07 61.6 57 47.4
DCAR_023922 Daucus carota HOM05D001383 ORTHO05D000309 1.7e-07 61.2 79 45.6
Lsat_1_v5_gn_1_1101 Lactuca sativa HOM05D001383 ORTHO05D000309 1.7e-07 61.2 64 50.0
SGA_v2.0_scaffold167G38437 Striga asiatica HOM05D001383 ORTHO05D000309 1.7e-07 61.2 100 35.0
vmacro20243 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.7e-07 61.2 61 49.2
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 2.2e-07 60.8 77 44.2
Oeu006956.1 Olea europaea HOM05D001383 ORTHO05D000309 2.2e-07 60.8 67 43.3
Rhsim08G0011500 Rhododendron simsii HOM05D001383 ORTHO05D000309 2.2e-07 60.8 73 42.5
SGA_v2.0_scaffold121G33159 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-07 60.8 87 42.5
SGA_v2.0_scaffold13G06411 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-07 60.8 73 41.1
HanXRQChr12g0370741 Helianthus annuus HOM05D001383 ORTHO05D000309 2.9e-07 60.5 62 50.0
HanXRQChr14g0429441 Helianthus annuus HOM05D001383 ORTHO05D000309 2.9e-07 60.5 118 34.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.9e-07 60.5 62 48.4
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 2.9e-07 60.5 65 46.2
Gohir.D11G247150 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.7e-07 60.1 71 40.8
Lsat_1_v5_gn_4_57040 Lactuca sativa HOM05D001383 ORTHO05D000309 3.7e-07 60.1 60 50.0
Oeu001038.1 Olea europaea HOM05D001383 ORTHO05D000309 3.7e-07 60.1 67 43.3
SGA_v2.0_scaffold174G39284 Striga asiatica HOM05D001383 ORTHO05D000309 3.7e-07 60.1 73 38.4
SGA_v2.0_scaffold22G09703 Striga asiatica HOM05D001383 ORTHO05D000309 3.7e-07 60.1 100 34.0
CANSAT56G3744 Cannabis sativa HOM05D001383 ORTHO05D000309 4.9e-07 59.7 95 40.0
CANSAT80G1681 Cannabis sativa HOM05D001383 ORTHO05D000309 4.9e-07 59.7 95 40.0
Lsat_1_v5_gn_4_701 Lactuca sativa HOM05D001383 ORTHO05D000309 4.9e-07 59.7 64 48.4
SGA_v2.0_scaffold80G25824 Striga asiatica HOM05D001383 ORTHO05D000309 4.9e-07 59.7 101 38.6
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 6.4e-07 59.3 110 39.1
Gohir.A09G200200 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.4e-07 59.3 71 40.8
Gohir.A13G017966 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.4e-07 59.3 71 40.8
Gohir.A13G041750 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.4e-07 59.3 71 39.4
DCAR_031289 Daucus carota HOM05D001383 ORTHO05D000309 8.3e-07 58.9 55 47.3
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 8.3e-07 58.9 71 39.4
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 8.3e-07 58.9 65 44.6
SGA_v2.0_scaffold23G10087 Striga asiatica HOM05D001383 ORTHO05D000309 8.3e-07 58.9 73 39.7
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 8.3e-07 58.9 89 39.3
Lsat_1_v5_gn_8_117981 Lactuca sativa HOM05D001383 ORTHO05D000309 1.1e-06 58.5 72 44.4
Oeu009049.1 Olea europaea HOM05D001383 ORTHO05D000309 1.1e-06 58.5 70 41.4
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 1.1e-06 58.5 66 47.0
SGA_v2.0_scaffold14G07096 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 58.5 71 38.0
SGA_v2.0_scaffold157G37340 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 58.5 100 34.0
SGA_v2.0_scaffold27G11596 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 58.5 66 45.5
DCAR_017568 Daucus carota HOM05D001383 ORTHO05D000309 1.4e-06 58.2 61 44.3
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 1.4e-06 58.2 63 50.8
Gohir.A12G210350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.4e-06 58.2 71 39.4
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-06 58.2 62 41.9
Hma1.2p1_1105F.1_g257590 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-06 58.2 59 42.4
DCAR_028616 Daucus carota HOM05D001383 ORTHO05D000309 1.9e-06 57.8 66 47.0
Gohir.A05G239250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.9e-06 57.8 71 39.4
Hma1.2p1_0896F.1_g233840 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-06 57.8 63 44.4
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.9e-06 57.8 97 38.1
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 1.9e-06 57.8 93 36.6
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 2.4e-06 57.4 79 44.3
DCAR_023033 Daucus carota HOM05D001383 ORTHO05D000309 2.4e-06 57.4 93 37.6
ECA246G1994 Erigeron canadensis HOM05D001383 ORTHO05D000309 2.4e-06 57.4 68 41.2
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 57.4 69 46.4
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 57.4 73 45.2
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 57.4 69 44.9
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 2.4e-06 57.4 85 40.0
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.4e-06 57.4 65 43.1
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 3.2e-06 57.0 126 35.7
Gohir.A13G164050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.2e-06 57.0 71 39.4
Hma1.2p1_2508F.1_g323550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-06 57.0 61 41.0
Lsat_1_v5_gn_8_84280 Lactuca sativa HOM05D001383 ORTHO05D000309 3.2e-06 57.0 61 47.5
Lsat_1_v5_gn_9_72040 Lactuca sativa HOM05D001383 ORTHO05D000309 3.2e-06 57.0 60 50.0
Oeu043155.1 Olea europaea HOM05D001383 ORTHO05D000309 3.2e-06 57.0 67 40.3
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-06 57.0 69 44.9
Peaxi162Scf00050g02421 Petunia axillaris HOM05D004040 ORTHO05D000309 4.1e-06 56.6 75 34.7
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 4.1e-06 56.6 71 43.7
SGA_v2.0_scaffold157G37387 Striga asiatica HOM05D001383 ORTHO05D000309 4.1e-06 56.6 102 37.3
vmacro20312 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 4.1e-06 56.6 60 43.3
DCAR_010613 Daucus carota HOM05D001383 ORTHO05D000309 5.4e-06 56.2 62 45.2
DCAR_029935 Daucus carota HOM05D001383 ORTHO05D000309 5.4e-06 56.2 76 47.4
Gohir.A10G122250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.4e-06 56.2 73 37.0
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 5.4e-06 56.2 67 41.8
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 5.4e-06 56.2 114 36.0
CAN.G162.74 Capsicum annuum HOM05D004040 ORTHO05D000309 7.1e-06 55.8 80 42.5
Migut.O00432 Erythranthe guttata HOM05D001383 ORTHO05D000309 7.1e-06 55.8 84 35.7
Peaxi162Scf00070g00024 Petunia axillaris HOM05D004040 ORTHO05D000309 7.1e-06 55.8 75 34.7
Peaxi162Scf00594g00013 Petunia axillaris HOM05D004040 ORTHO05D000309 7.1e-06 55.8 75 34.7
Peaxi162Scf01303g00011 Petunia axillaris HOM05D004040 ORTHO05D000309 7.1e-06 55.8 75 34.7
DCAR_022822 Daucus carota HOM05D001383 ORTHO05D000309 9.2e-06 55.5 61 41.0
DCAR_022824 Daucus carota HOM05D001383 ORTHO05D000309 9.2e-06 55.5 61 41.0
Lsat_1_v5_gn_6_80580 Lactuca sativa HOM05D001383 ORTHO05D000309 9.2e-06 55.5 61 49.2
Nitab4.5_0003998g0050 Nicotiana tabacum HOM05D001383 ORTHO05D000309 9.2e-06 55.5 68 41.2
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 9.2e-06 55.5 56 50.0


User provided reference genes

Program Settings