Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 1.1e-146 523.5 297 100.0
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.7e-38 164.1 379 36.1
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 2.2e-38 163.7 379 35.1
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 8.0e-33 145.2 357 35.9
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 2.0e-31 140.6 364 34.1
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 3.4e-31 139.8 391 33.8
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.3e-30 137.9 406 32.3
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 1.1e-29 134.8 315 37.1
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 2.5e-26 123.6 121 56.2
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.2e-26 122.9 343 33.8
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 1.2e-25 121.3 418 32.3
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 6.1e-25 119.0 122 54.1
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 6.1e-25 119.0 122 54.1
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 6.1e-25 119.0 119 54.6
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 8.0e-25 118.6 190 42.6
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 8.0e-25 118.6 190 42.6
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.0e-24 118.2 380 30.8
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 1.4e-24 117.9 121 54.5
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 2.3e-24 117.1 419 28.9
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.3e-24 117.1 400 28.0
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 4.0e-24 116.3 121 55.4
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 5.2e-24 115.9 126 53.2
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 8.9e-24 115.2 118 55.1
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 1.2e-23 114.8 111 57.7
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 1.5e-23 114.4 120 53.3
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 2.0e-23 114.0 403 30.8
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 2.6e-23 113.6 118 61.0
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 3.4e-23 113.2 118 54.2
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 4.4e-23 112.8 124 50.8
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 5.7e-23 112.5 340 30.9
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 5.7e-23 112.5 133 51.1
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 9.8e-23 111.7 122 53.3
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.3e-22 111.3 122 50.0
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.7e-22 110.9 125 53.6
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.7e-22 110.9 128 50.8
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.2e-22 110.5 125 50.4
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 3.7e-22 109.8 125 56.8
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.7e-22 109.8 115 51.3
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 6.3e-22 109.0 121 56.2
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 8.3e-22 108.6 123 49.6
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 1.1e-21 108.2 129 51.2
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.8e-21 107.5 131 48.1
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 1.8e-21 107.5 128 50.8
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 3.2e-21 106.7 123 56.1
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 4.1e-21 106.3 131 47.3
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 5.4e-21 105.9 130 50.8
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.2e-20 104.8 119 49.6
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 2.7e-20 103.6 122 55.7
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.7e-20 103.6 126 50.8
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 4.5e-20 102.8 126 56.3
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 5.9e-20 102.4 363 32.8
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 5.9e-20 102.4 130 47.7
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.9e-20 102.4 126 50.0
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 1.3e-19 101.3 386 29.8
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.7e-19 100.9 126 56.3
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 2.3e-19 100.5 345 33.3
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 2.3e-19 100.5 407 29.7
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.3e-19 100.5 129 48.1
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.3e-19 100.5 116 52.6
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 3.9e-19 99.8 374 31.3
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 3.9e-19 99.8 135 50.4
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 6.6e-19 99.0 116 52.6
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 6.6e-19 99.0 121 55.4
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 8.6e-19 98.6 149 44.3
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.9e-18 97.4 133 54.9
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 3.3e-18 96.7 360 31.7
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 3.3e-18 96.7 390 30.5
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 7.3e-18 95.5 117 49.6
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 7.3e-18 95.5 119 50.4
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.3e-18 95.5 341 30.2
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 9.5e-18 95.1 125 51.2
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 9.5e-18 95.1 334 31.1
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 9.5e-18 95.1 130 53.1
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.2e-17 94.7 119 55.5
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.2e-17 94.7 132 52.3
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 2.1e-17 94.0 135 48.9
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 2.8e-17 93.6 134 53.0
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 4.7e-17 92.8 347 31.4
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 4.7e-17 92.8 125 50.4
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 6.1e-17 92.4 124 49.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 8.0e-17 92.0 130 49.2
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.8e-16 90.9 130 46.2
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 3.1e-16 90.1 133 45.1
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 3.1e-16 90.1 420 30.2
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.1e-16 90.1 171 38.0
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 4.0e-16 89.7 407 28.7
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 5.2e-16 89.4 132 53.0
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.2e-15 88.2 304 33.6
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.2e-15 88.2 121 54.5
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.2e-15 88.2 121 54.5
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.5e-15 87.8 409 26.9
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 2.0e-15 87.4 124 50.8
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.6e-15 87.0 134 47.8
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 4.4e-15 86.3 415 29.6
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 5.8e-15 85.9 134 50.0
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 5.8e-15 85.9 135 41.5
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 7.5e-15 85.5 121 43.0
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 9.8e-15 85.1 132 52.3
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 9.8e-15 85.1 132 52.3
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 9.8e-15 85.1 132 52.3
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 2.2e-14 84.0 167 37.7
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 2.9e-14 83.6 140 44.3
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 6.4e-14 82.4 394 27.9
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 2.4e-13 80.5 128 49.2
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 3.2e-13 80.1 394 28.4
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 3.2e-13 80.1 315 29.5
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 3.2e-13 80.1 171 35.7
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 7.0e-13 79.0 126 42.1
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 2.0e-12 77.4 387 24.8
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 3.5e-12 76.6 133 47.4
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 4.6e-12 76.3 127 48.0
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 7.8e-12 75.5 401 28.2
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 7.8e-12 75.5 401 28.2
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 1.0e-11 75.1 405 28.4
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 1.0e-11 75.1 56 66.1
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 1.3e-11 74.7 400 28.0
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 1.7e-11 74.3 134 46.3
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 2.3e-11 73.9 132 46.2
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 2.3e-11 73.9 109 55.0
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 3.9e-11 73.2 322 32.6
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 1.9e-10 70.9 121 48.8
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 3.3e-10 70.1 149 40.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 7.3e-10 68.9 301 28.9
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 9.5e-10 68.6 342 27.5
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 1.2e-09 68.2 342 26.9
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 2.1e-09 67.4 104 44.2
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 2.0e-07 60.8 124 37.9
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.3e-06 58.2 298 26.5


User provided reference genes

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