Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01604 Striga asiatica HOM05D000151 ORTHO05D000074 2.0e-157 558.9 260 100.0
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 8.5e-55 218.0 272 44.1
SalBow3G2007 Salvia bowleyana HOM05D000151 ORTHO05D000074 2.7e-53 213.0 247 41.7
Oeu016486.1 Olea europaea HOM05D000151 ORTHO05D000074 3.6e-37 159.5 279 35.8
Oeu049041.1 Olea europaea HOM05D000151 ORTHO05D000074 5.2e-36 155.6 175 44.0
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 3.1e-33 146.4 175 40.6
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 3.3e-30 136.3 258 35.3
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 5.5e-30 135.6 258 34.9
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.0e-28 129.4 243 35.4
TWI63G1408 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.6e-27 126.7 266 34.2
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 2.2e-26 123.6 258 32.6
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.8e-25 120.6 274 32.5
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.2e-24 117.9 257 32.7
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.6e-24 117.5 241 36.5
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 7.8e-24 115.2 241 36.1
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 1.1e-22 111.3 276 31.2
Ciclev10006417m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.8e-21 106.7 202 33.7
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 4.7e-21 105.9 259 28.2
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 8.0e-21 105.1 257 31.9
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-20 104.4 259 29.0
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.4e-20 104.4 282 31.2
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.8e-20 104.0 201 31.8
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.8e-20 104.0 201 31.8
Lj5g0028068 Lotus japonicus HOM05D000151 ORTHO05D000074 2.3e-20 103.6 260 31.9
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 5.2e-20 102.4 258 29.8
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 5.2e-20 102.4 270 31.5
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 8.9e-20 101.7 258 29.5
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 8.9e-20 101.7 201 31.8
arahy.Tifrunner.gnm1.ann1.AQ7QDK Arachis hypogaea HOM05D000151 ORTHO05D000074 2.6e-19 100.1 260 29.2
Haze_16880 Corylus avellana HOM05D000151 ORTHO05D000074 2.6e-19 100.1 258 30.2
Lj5g0007991 Lotus japonicus HOM05D000151 ORTHO05D000074 3.4e-19 99.8 260 31.5
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-18 97.8 259 27.8
arahy.Tifrunner.gnm1.ann1.U0YPSU Arachis hypogaea HOM05D000151 ORTHO05D000074 1.7e-18 97.4 266 30.1
arahy.Tifrunner.gnm1.ann1.SZA14E Arachis hypogaea HOM05D000151 ORTHO05D000074 4.9e-18 95.9 262 30.9
Cfa001991 Carpinus fangiana HOM05D000151 ORTHO05D000074 4.9e-18 95.9 262 29.8
arahy.Tifrunner.gnm1.ann1.K2BGZI Arachis hypogaea HOM05D000151 ORTHO05D000074 8.3e-18 95.1 260 29.6
arahy.Tifrunner.gnm1.ann1.QH76HY Arachis hypogaea HOM05D000151 ORTHO05D000074 1.4e-17 94.4 258 28.7
arahy.Tifrunner.gnm1.ann1.S5CNIB Arachis hypogaea HOM05D000151 ORTHO05D000074 1.4e-17 94.4 260 28.8
Dinv27123 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-17 94.0 192 33.3
arahy.Tifrunner.gnm1.ann1.EK4ZNN Arachis hypogaea HOM05D000151 ORTHO05D000074 3.2e-17 93.2 257 29.6
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 3.2e-17 93.2 203 34.5
Prupe.1G050500 Prunus persica HOM05D000151 ORTHO05D000074 7.0e-17 92.0 232 28.9
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 2.0e-16 90.5 259 30.1
Lj3g0002558 Lotus japonicus HOM05D000151 ORTHO05D000074 2.7e-16 90.1 265 30.2
Lalb_Chr13g0300791 Lupinus albus HOM05D000151 ORTHO05D000074 6.0e-16 89.0 254 30.3
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 7.8e-16 88.6 275 28.0
CiPaw.16G031700 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.7e-15 87.4 252 30.6
Haze_02452 Corylus avellana HOM05D000151 ORTHO05D000074 1.7e-15 87.4 261 27.2
FAN14G1586 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.9e-15 86.3 245 29.4
Lj3g0025043 Lotus japonicus HOM05D000151 ORTHO05D000074 5.0e-15 85.9 263 28.5
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 8.6e-15 85.1 255 27.8
Potri.004G137700 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.5e-14 84.3 251 29.1
Psat0s2366g0040 Pisum sativum HOM05D000151 ORTHO05D000074 7.3e-14 82.0 264 28.0
Actinidia13986 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.2e-13 81.3 214 29.9
DCAR_012644 Daucus carota HOM05D000151 ORTHO05D000074 1.2e-13 81.3 253 30.8
Lj3g0006900 Lotus japonicus HOM05D000151 ORTHO05D000074 2.1e-13 80.5 196 32.1
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.6e-13 79.7 143 34.3
Ca_20712_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 2.3e-12 77.0 258 26.4
TWI09G0382 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.0e-12 76.3 255 25.5
Cfa001655 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.5e-11 74.3 175 30.9
TWI63G1822 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.4e-11 73.2 271 27.3
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 9.8e-11 71.6 254 27.6
arahy.Tifrunner.gnm1.ann1.V4EFIG Arachis hypogaea HOM05D000151 ORTHO05D000074 2.2e-10 70.5 186 28.5
Dinv14673 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-10 70.1 225 27.6
Thecc.04G267400 Theobroma cacao HOM05D000151 ORTHO05D000074 6.4e-10 68.9 93 41.9
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-09 67.8 275 28.7
Rhsim04G0081100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.4e-09 67.8 245 26.1
CiPaw.01G271700 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.2e-09 66.6 236 27.5
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.1e-09 66.2 288 26.0
FAN02G4001 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.0e-08 62.4 218 29.4
TWI09G0953 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-07 60.8 134 29.9
QL08p055347 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-06 57.4 204 25.5
Rhsim07G0073900 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.3e-06 55.5 183 28.4


User provided reference genes

Program Settings