Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01596 Striga asiatica HOM05D009210 ORTHO05D015998 0.0e+00 1166.0 566 100.0
MSTRG.17532 Avicennia marina HOM05D013334 ORTHO05D015998 5.9e-93 345.9 600 40.8
SalBow6G1944 Salvia bowleyana HOM05D013334 ORTHO05D010367 2.2e-71 274.2 705 32.2
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 9.8e-64 248.8 606 34.3
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 3.3e-27 127.5 598 25.8
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 5.1e-20 103.6 455 27.9
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 5.1e-20 103.6 455 27.9
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 1.9e-19 101.7 456 27.6
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 8.1e-18 96.3 579 26.1
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 3.1e-17 94.4 271 28.4
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 6.4e-15 86.7 416 26.2
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 1.6e-13 82.0 234 31.2
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 2.7e-13 81.3 508 24.2
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 3.5e-13 80.9 376 26.1
TPR.G25869 Trifolium pratense HOM05D014010 ORTHO05D010367 1.8e-12 78.6 225 29.8
Sopen06g035070 Solanum pennellii HOM05D013334 ORTHO05D015998 2.3e-12 78.2 381 27.3
Nitab4.5_0002330g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 3.0e-12 77.8 386 26.9
Nitab4.5_0001557g0020 Nicotiana tabacum HOM05D013334 ORTHO05D015998 1.1e-11 75.9 396 27.5
CSS0048272 Camellia sinensis var. sinensis HOM05D009210 ORTHO05D010367 1.5e-11 75.5 282 27.3
Medtr1g069195 Medicago truncatula HOM05D014010 ORTHO05D010367 4.3e-11 73.9 187 33.7
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 7.4e-11 73.2 311 26.4
CAN.G771.49 Capsicum annuum HOM05D013334 ORTHO05D015998 2.8e-10 71.2 204 32.4
Lalb_Chr02g0152931 Lupinus albus HOM05D014010 ORTHO05D010367 2.4e-09 68.2 240 27.1
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 3.1e-09 67.8 382 23.6
Psat6g065120 Pisum sativum HOM05D014010 ORTHO05D010367 5.3e-09 67.0 212 28.8
CiPaw.04G192300 Carya illinoinensis HOM05D009210 ORTHO05D010367 6.9e-09 66.6 164 34.1
Sp3g33480 Schrenkiella parvula HOM05D012015 ORTHO05D014750 9.0e-09 66.2 211 32.2
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 1.5e-08 65.5 429 22.6
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 2.6e-08 64.7 86 45.3
QL09p043642 Quercus lobata HOM05D009210 ORTHO05D010367 4.5e-08 63.9 524 24.4
Aa31LG8G17240 Aethionema arabicum HOM05D012015 ORTHO05D014750 5.8e-08 63.5 381 26.0
DCAR_000542 Daucus carota HOM05D009210 ORTHO05D010367 5.8e-08 63.5 209 28.7
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 1.3e-07 62.4 240 29.2
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 1.3e-07 62.4 234 29.5
Peaxi162Scf00517g00315 Petunia axillaris HOM05D013334 ORTHO05D015998 1.7e-07 62.0 245 29.8
AUR62008852 Chenopodium quinoa HOM05D017699 ORTHO05D019543 3.8e-07 60.8 203 30.5
Solyc06g083670.4 Solanum lycopersicum HOM05D013334 ORTHO05D015998 1.1e-06 59.3 260 27.7
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 1.4e-06 58.9 229 28.4
AL3G47840 Arabidopsis lyrata HOM05D012015 ORTHO05D014750 5.5e-06 57.0 169 31.4
Glyma.13G129600 Glycine max HOM05D014010 ORTHO05D010367 5.5e-06 57.0 260 25.8
Hund18342 Selenicereus undatus HOM05D017699 ORTHO05D019543 5.5e-06 57.0 261 24.5
ECA236G3347 Erigeron canadensis HOM05D040207 ORTHO05D010367 7.1e-06 56.6 190 25.8


User provided reference genes

Program Settings