Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 0.0e+00 1271.1 634 100.0
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 2.7e-272 941.8 634 73.0
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.3e-261 906.4 634 71.9
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 3.7e-253 878.2 634 68.9
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.3e-185 652.5 642 53.7
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 7.3e-185 651.4 642 53.4
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 2.4e-183 646.4 632 55.9
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 2.4e-180 636.3 646 52.9
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 5.4e-180 635.2 639 53.2
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.1e-177 627.5 640 52.7
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 2.5e-177 626.3 640 52.5
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 1.9e-169 600.1 642 51.7
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 3.7e-168 595.9 655 49.5
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.1e-164 584.3 639 50.9
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 3.5e-163 579.3 640 49.8
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 1.3e-160 570.9 637 49.6
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.4e-159 566.6 639 50.1
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 2.6e-158 563.1 637 49.5
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.0e-157 561.2 637 49.0
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.1e-156 557.8 640 49.2
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.4e-156 557.4 636 48.4
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 8.7e-154 548.1 643 48.8
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 3.3e-153 546.2 640 49.1
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.6e-152 543.9 635 47.2
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.7e-152 542.7 731 44.7
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 6.3e-152 542.0 638 47.2
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.1e-151 541.2 640 48.0
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 1.4e-148 530.8 636 47.8
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 2.5e-148 530.0 645 47.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 2.5e-148 530.0 591 49.2
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 2.1e-147 526.9 639 46.8
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 2.3e-146 523.5 639 47.3
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 3.3e-145 519.6 645 46.4
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 6.3e-144 515.4 636 47.8
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.8e-143 513.8 632 46.5
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 4.1e-143 512.7 645 45.6
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 9.1e-143 511.5 632 46.4
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 9.1e-143 511.5 632 46.4
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 2.6e-142 510.0 638 45.1
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 3.4e-142 509.6 637 44.3
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.0e-141 508.1 638 46.4
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 6.5e-141 505.4 637 45.7
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.4e-140 504.2 634 46.1
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 7.2e-140 501.9 648 46.0
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 1.2e-139 501.1 638 45.6
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.6e-139 500.7 637 46.8
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.1e-139 500.4 635 46.0
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 3.6e-139 499.6 637 46.0
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 3.6e-139 499.6 637 46.5
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 6.1e-139 498.8 551 50.8
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 3.0e-138 496.5 646 45.2
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 5.1e-138 495.7 660 43.9
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 1.1e-137 494.6 644 45.5
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.5e-137 494.2 673 44.9
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 9.7e-137 491.5 643 45.3
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 9.7e-137 491.5 641 46.0
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 1.3e-136 491.1 645 43.9
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.3e-133 481.1 703 43.1
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 2.2e-133 480.3 642 45.0
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.2e-131 474.6 638 44.0
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 1.2e-131 474.6 638 44.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.6e-131 474.2 641 44.9
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 2.1e-131 473.8 638 44.5
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 4.7e-131 472.6 642 44.2
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 2.3e-130 470.3 607 46.3
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 8.8e-130 468.4 640 42.8
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 4.8e-128 462.6 636 43.4
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.2e-126 458.0 635 44.3
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 1.1e-124 451.4 636 43.1
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 4.2e-124 449.5 646 45.2
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.6e-123 447.6 495 51.1
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 8.8e-122 441.8 500 46.8
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 2.0e-121 440.7 639 42.9
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.4e-121 439.5 397 59.4
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.2e-115 421.4 646 43.2
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 8.0e-115 418.7 640 40.9
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.2e-113 414.8 494 48.6
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 1.1e-108 398.3 666 38.4
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 8.9e-106 388.7 494 46.8
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 4.3e-92 343.2 396 49.0
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 9.8e-89 332.0 327 56.3
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 8.3e-88 328.9 412 46.1
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.6e-78 298.1 391 43.5
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 2.8e-75 287.3 284 56.7
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.2e-71 273.9 225 62.7
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 1.7e-69 268.1 317 49.8
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 1.1e-68 265.4 325 45.2
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 2.9e-64 250.8 278 51.4
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 1.1e-63 248.8 321 48.0
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 1.2e-57 228.8 280 50.0
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 3.0e-53 214.2 273 48.4
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 1.3e-48 198.7 706 27.6
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 1.9e-47 194.9 160 56.9
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 2.5e-47 194.5 431 32.9
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 1.0e-45 189.1 318 38.7
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 1.0e-40 172.6 226 46.9
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.3e-40 172.2 291 37.1
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 2.2e-40 171.4 257 41.2
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 4.2e-39 167.2 645 26.0
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 2.5e-36 157.9 296 35.8
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 1.2e-33 149.1 151 55.6
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 6.9e-26 123.2 247 34.8
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 6.9e-26 123.2 379 28.0
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 4.2e-23 114.0 175 45.7
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 8.8e-21 106.3 513 25.3
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 8.8e-21 106.3 136 43.4
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 3.3e-20 104.4 141 41.8
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.8e-19 101.3 136 42.6
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 2.8e-19 101.3 155 37.4
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 3.7e-19 100.9 350 28.0
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 4.1e-18 97.4 175 36.0
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 2.0e-17 95.1 133 44.4
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 3.5e-17 94.4 122 42.6
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 3.8e-16 90.9 101 45.5
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 6.1e-14 83.6 128 36.7
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.1e-12 79.3 124 36.3
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 1.1e-10 72.8 113 37.2
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 7.7e-09 66.6 90 40.0
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 3.2e-07 61.2 78 41.0
CDE09G0654 Ceratophyllum demersum HOM05D006061 ORTHO05D007450 7.2e-07 60.1 79 43.0


User provided reference genes

Program Settings