Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 1.7e-51 206.1 135 100.0
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 3.4e-23 112.1 52 96.2
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 3.0e-11 72.4 103 41.7
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 8.7e-11 70.9 103 39.8
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 8.7e-11 70.9 103 39.8
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 8.7e-11 70.9 103 39.8
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-10 69.3 103 39.8
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-10 69.3 103 39.8
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 3.3e-10 68.9 103 39.8
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 2.8e-09 65.9 103 38.8
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 3.7e-09 65.5 90 41.1
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 3.1e-08 62.4 103 37.9
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 4.0e-08 62.0 88 39.8
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.3e-08 61.6 77 41.6
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 9.0e-08 60.8 83 39.8
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-07 60.1 84 40.5
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.5e-07 60.1 49 49.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-07 59.3 44 56.8
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 3.4e-07 58.9 65 40.0
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.4e-07 58.9 57 47.4
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 3.4e-07 58.9 78 38.5
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.8e-07 58.2 73 38.4
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.8e-07 58.2 73 38.4
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.8e-07 58.2 73 41.1
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 7.6e-07 57.8 83 33.7
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-07 57.8 63 46.0
Rhsim02G0156200 Rhododendron simsii HOM05D020684 ORTHO05D000309 7.6e-07 57.8 62 43.5
EL10Ac2g03429 Beta vulgaris HOM05D008388 ORTHO05D000309 1.0e-06 57.4 80 38.8
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.0e-06 57.4 63 39.7
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.0e-06 57.4 54 42.6
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.4 73 39.7
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.4 73 39.7
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.4 73 39.7
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.4 71 40.8
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-06 57.0 54 42.6
DCAR_026361 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-06 57.0 75 38.7
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 73 39.7
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 74 41.9
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 1.3e-06 57.0 44 59.1
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 1.3e-06 57.0 44 59.1
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 77 35.1
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 77 35.1
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 1.7e-06 56.6 44 50.0
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 1.7e-06 56.6 44 50.0
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-06 56.6 73 38.4
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-06 56.6 50 46.0
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 56.6 66 45.5
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.2e-06 56.2 66 39.4
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.2e-06 56.2 44 54.5
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.2e-06 56.2 49 46.9
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 55.8 55 49.1
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.8e-06 55.5 75 45.3
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 3.8e-06 55.5 79 39.2
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.8e-06 55.5 77 33.8
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-06 55.1 91 34.1
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-06 55.1 55 47.3
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-06 55.1 73 39.7
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 4.9e-06 55.1 77 33.8
TPR.G10560 Trifolium pratense HOM05D009039 ORTHO05D011159 4.9e-06 55.1 77 39.0
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 6.5e-06 54.7 86 38.4
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.5e-06 54.7 75 44.0
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.5e-06 54.7 57 40.4
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-06 54.7 79 39.2
Solyc03g083735.1 Solanum lycopersicum HOM05D008126 ORTHO05D000309 6.5e-06 54.7 49 44.9
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 6.5e-06 54.7 77 35.1
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 6.5e-06 54.7 90 36.7
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 8.4e-06 54.3 50 48.0
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 8.4e-06 54.3 88 31.8
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.4e-06 54.3 81 30.9
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.4e-06 54.3 44 50.0
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 8.4e-06 54.3 70 44.3
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 8.4e-06 54.3 74 36.5
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 8.4e-06 54.3 86 36.0


User provided reference genes

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