Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01524 Striga asiatica HOM05D011217 ORTHO05D013910 2.3e-113 412.1 198 100.0
SGA_v2.0_scaffold37G14639 Striga asiatica HOM05D011217 ORTHO05D013910 2.0e-64 249.6 124 92.7
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 2.0e-64 249.6 124 92.7
SGA_v2.0_scaffold659G53391 Striga asiatica HOM05D011217 ORTHO05D013910 2.5e-54 216.1 107 93.5
SGA_v2.0_scaffold44G16775 Striga asiatica HOM05D011217 ORTHO05D013910 4.0e-28 129.0 116 58.6
SGA_v2.0_scaffold225G43046 Striga asiatica HOM05D011217 ORTHO05D013910 1.2e-21 107.5 141 39.0
SGA_v2.0_scaffold260G45875 Striga asiatica HOM05D011217 ORTHO05D013910 1.4e-12 77.4 116 36.2
SGA_v2.0_scaffold109G31168 Striga asiatica HOM05D011217 ORTHO05D013910 1.1e-09 67.8 93 34.4
Lalb_Chr06g0172711 Lupinus albus HOM05D000665 ORTHO05D000140 1.2e-08 64.3 111 30.6
Sc03g0004530 Simmondsia chinensis HOM05D000876 ORTHO05D000285 3.5e-08 62.8 113 27.4
Lj1g0024899 Lotus japonicus HOM05D000665 ORTHO05D000921 1.5e-06 57.4 93 33.3
Dinv09638 Davidia involucrata HOM05D008473 ORTHO05D000921 1.9e-06 57.0 95 31.6
SGA_v2.0_scaffold223G42834 Striga asiatica HOM05D011217 ORTHO05D013910 1.9e-06 57.0 122 29.5
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 4.3e-06 55.8 89 32.6
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 4.3e-06 55.8 125 28.8
Psat0s3985g0040 Pisum sativum HOM05D000665 ORTHO05D000140 4.3e-06 55.8 111 26.1
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 4.3e-06 55.8 98 31.6
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 5.6e-06 55.5 117 28.2
Glyma.02G193300 Glycine max HOM05D000665 ORTHO05D000140 9.5e-06 54.7 112 25.0


User provided reference genes

Program Settings