Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 6.6e-87 323.9 156 100.0
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.5e-43 179.9 208 48.6
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 8.7e-39 164.1 112 73.2
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 1.5e-38 163.3 113 70.8
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 9.0e-36 154.1 113 69.0
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.0e-34 150.6 113 65.5
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 5.0e-34 148.3 111 63.1
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 5.0e-34 148.3 111 63.1
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 8.5e-34 147.5 111 64.9
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.4e-33 146.7 129 56.6
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.9e-33 146.4 113 62.8
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.9e-33 146.4 111 63.1
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 7.2e-33 144.4 109 62.4
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 9.4e-33 144.1 113 62.8
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 9.4e-33 144.1 113 60.2
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 9.4e-33 144.1 113 62.8
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 2.1e-32 142.9 113 59.3
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 1.0e-31 140.6 113 61.1
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.8e-31 139.8 105 64.8
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.8e-31 139.8 113 61.1
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 2.3e-31 139.4 114 59.6
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 3.0e-31 139.0 113 61.9
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 3.0e-31 139.0 118 60.2
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 3.0e-31 139.0 105 63.8
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 3.0e-31 139.0 105 63.8
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 3.9e-31 138.7 113 58.4
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 3.9e-31 138.7 113 59.3
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 3.9e-31 138.7 105 61.0
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 8.8e-31 137.5 107 62.6
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 8.8e-31 137.5 113 61.9
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.5e-30 136.7 113 59.3
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.5e-30 136.7 113 59.3
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 2.5e-30 136.0 113 57.5
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 2.5e-30 136.0 116 59.5
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 4.3e-30 135.2 112 58.0
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 7.4e-30 134.4 107 61.7
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 7.4e-30 134.4 104 63.5
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 9.7e-30 134.0 122 57.4
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 9.7e-30 134.0 122 57.4
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.3e-29 133.7 105 61.9
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 1.3e-29 133.7 123 55.3
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.3e-29 133.7 124 55.6
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 1.3e-29 133.7 114 59.6
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 1.7e-29 133.3 105 60.0
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.7e-29 133.3 113 57.5
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 2.2e-29 132.9 111 60.4
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 2.2e-29 132.9 105 61.9
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 2.2e-29 132.9 101 60.4
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 2.2e-29 132.9 116 59.5
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 2.2e-29 132.9 113 58.4
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 2.2e-29 132.9 113 58.4
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.8e-29 132.5 110 59.1
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 2.8e-29 132.5 111 60.4
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 3.7e-29 132.1 107 61.7
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 3.7e-29 132.1 101 59.4
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 4.8e-29 131.7 107 61.7
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 4.8e-29 131.7 107 61.7
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 4.8e-29 131.7 105 61.0
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 6.3e-29 131.3 105 59.0
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 6.3e-29 131.3 118 57.6
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 6.3e-29 131.3 116 58.6
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 8.2e-29 131.0 85 68.2
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 8.2e-29 131.0 113 58.4
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.1e-28 130.6 115 57.4
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.1e-28 130.6 102 60.8
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 1.1e-28 130.6 113 60.2
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 1.4e-28 130.2 116 57.8
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 1.4e-28 130.2 102 61.8
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.4e-28 130.2 104 60.6
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.8e-28 129.8 105 61.0
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.4e-28 129.4 109 59.6
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 2.4e-28 129.4 112 57.1
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 4.1e-28 128.6 104 61.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 4.1e-28 128.6 115 56.5
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 6.9e-28 127.9 114 57.9
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.2e-27 127.1 158 44.3
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.2e-27 127.1 102 59.8
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.2e-27 127.1 116 56.9
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.5e-27 126.7 114 57.9
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 2.0e-27 126.3 113 55.8
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.0e-27 126.3 85 68.2
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 2.6e-27 125.9 112 56.2
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 2.6e-27 125.9 112 56.2
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 3.4e-27 125.6 100 63.0
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 3.4e-27 125.6 107 57.0
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 4.5e-27 125.2 105 57.1
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 5.9e-27 124.8 107 57.9
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.0e-26 124.0 112 54.5
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 1.0e-26 124.0 102 58.8
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 1.3e-26 123.6 112 54.5
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 1.3e-26 123.6 117 56.4
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.3e-26 123.6 112 53.6
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.7e-26 123.2 108 54.6
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 3.8e-26 122.1 105 56.2
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 5.0e-26 121.7 102 55.9
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 5.0e-26 121.7 102 55.9
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 5.0e-26 121.7 115 53.9
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 6.5e-26 121.3 105 57.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.5e-26 121.3 114 51.8
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 6.5e-26 121.3 75 72.0
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.1e-25 120.6 110 53.6
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.4e-25 120.2 95 64.2
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 3.2e-25 119.0 104 55.8
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 6.1e-24 114.8 103 53.4
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.0e-23 114.0 69 71.0
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.0e-23 114.0 105 53.3
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.0e-23 114.0 88 58.0
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 7.4e-22 107.8 105 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.2e-21 106.3 102 52.0
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 3.7e-21 105.5 110 52.7
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 4.1e-20 102.1 104 47.1
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 9.1e-20 100.9 83 61.4
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 5.0e-18 95.1 68 58.8
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 3.6e-16 89.0 50 82.0
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 1.0e-15 87.4 139 41.0
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 8.8e-15 84.3 68 55.9
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 5.7e-14 81.6 51 70.6
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 6.3e-13 78.2 110 41.8
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 2.0e-11 73.2 100 37.0
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.0e-11 73.2 77 40.3
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.5e-11 72.4 42 73.8
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 1.4e-07 60.5 65 47.7
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 1.8e-07 60.1 65 47.7


User provided reference genes

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