Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15310 Striga asiatica HOM05D004695 ORTHO05D005372 3.6e-52 208.0 106 100.0
SGA_v2.0_scaffold39G15314 Striga asiatica HOM05D004695 ORTHO05D005372 3.9e-14 81.6 98 54.1
SalBow2G2333 Salvia bowleyana HOM05D004695 ORTHO05D005372 8.1e-12 73.9 104 50.0
Gohir.A10G084407 Gossypium hirsutum HOM05D004695 ORTHO05D005372 9.9e-10 67.0 86 48.8
Gohir.D10G104100 Gossypium hirsutum HOM05D004695 ORTHO05D005372 9.9e-10 67.0 86 48.8
Gorai.011G113700 Gossypium raimondii HOM05D004695 ORTHO05D005372 9.9e-10 67.0 86 48.8
Atru.chr4.2536 Acer truncatum HOM05D004695 ORTHO05D005372 2.2e-09 65.9 93 43.0
Nitab4.5_0015975g0010 Nicotiana tabacum HOM05D004695 ORTHO05D005372 2.2e-09 65.9 88 45.5
Nitab4.5_0000630g0080 Nicotiana tabacum HOM05D004695 ORTHO05D005372 6.4e-09 64.3 86 48.8
TPR.G912 Trifolium pratense HOM05D004695 ORTHO05D005372 6.4e-09 64.3 97 40.2
Medtr4g131720 Medicago truncatula HOM05D004695 ORTHO05D005372 1.1e-08 63.5 97 39.2
GSVIVG01017906001 Vitis vinifera HOM05D004695 ORTHO05D005372 1.1e-08 63.5 86 46.5
CANSAT78G0872 Cannabis sativa HOM05D004695 ORTHO05D005372 1.4e-08 63.2 93 43.0
Thecc.01G113400 Theobroma cacao HOM05D004695 ORTHO05D005372 1.4e-08 63.2 86 46.5
Manes.03G182700 Manihot esculenta HOM05D004695 ORTHO05D005372 3.2e-08 62.0 87 44.8
Rhsim04G0203400 Rhododendron simsii HOM05D004695 ORTHO05D005372 3.2e-08 62.0 90 46.7
TWI09G0501 Tripterygium wilfordii HOM05D004695 ORTHO05D005372 3.2e-08 62.0 88 48.9
Duzib264G0758 Durio zibethinus HOM05D004695 ORTHO05D005372 4.1e-08 61.6 88 44.3
QL06p003781 Quercus lobata HOM05D004695 ORTHO05D005372 4.1e-08 61.6 87 48.3
Ciclev10006235m.g Citrus clementina HOM05D004695 ORTHO05D005372 5.4e-08 61.2 86 45.3
Migut.G00305 Erythranthe guttata HOM05D004695 ORTHO05D005372 5.4e-08 61.2 100 47.0
Gorai.003G047400 Gossypium raimondii HOM05D004695 ORTHO05D005372 7.1e-08 60.8 86 47.7
COL.COLO4_26631 Corchorus olitorius HOM05D004695 ORTHO05D005372 9.2e-08 60.5 88 45.5
Actinidia23502 Actinidia chinensis HOM05D004695 ORTHO05D005372 1.2e-07 60.1 83 47.0
COL.COLO4_11008 Corchorus olitorius HOM05D004695 ORTHO05D005372 1.2e-07 60.1 87 43.7
Gohir.D03G046400 Gossypium hirsutum HOM05D004695 ORTHO05D005372 1.2e-07 60.1 86 47.7
Psat1g182680 Pisum sativum HOM05D004695 ORTHO05D005372 1.2e-07 60.1 105 39.0
Cfa015601 Carpinus fangiana HOM05D004695 ORTHO05D005372 2.1e-07 59.3 92 44.6
FvH4_4g14800 Fragaria vesca HOM05D004695 ORTHO05D005372 2.1e-07 59.3 88 44.3
FAN12G3688 Fragaria x ananassa HOM05D004695 ORTHO05D005372 2.1e-07 59.3 88 44.3
Prupe.1G153300 Prunus persica HOM05D004695 ORTHO05D005372 2.1e-07 59.3 86 43.0
FAN22G2275 Fragaria x ananassa HOM05D004695 ORTHO05D005372 2.7e-07 58.9 88 44.3
Solyc01g079830.3 Solanum lycopersicum HOM05D004695 ORTHO05D005372 2.7e-07 58.9 87 44.8
Aqoxy2G03294 Aquilegia oxysepala HOM05D004695 ORTHO05D005372 3.5e-07 58.5 86 47.7
Eucgr.B01119 Eucalyptus grandis HOM05D004695 ORTHO05D005372 3.5e-07 58.5 87 47.1
RcHm_v2.0_Chr4g0417511 Rosa chinensis HOM05D004695 ORTHO05D005372 3.5e-07 58.5 88 44.3
Thecc.04G224700 Theobroma cacao HOM05D004695 ORTHO05D005372 3.5e-07 58.5 86 44.2
TWI73G0302 Tripterygium wilfordii HOM05D004695 ORTHO05D005372 3.5e-07 58.5 85 44.7
Glyma.13G207100 Glycine max HOM05D004695 ORTHO05D005372 4.6e-07 58.2 91 42.9
Hma1.2p1_0995F.1_g245790 Hydrangea macrophylla HOM05D004695 ORTHO05D005372 4.6e-07 58.2 97 44.3
Lalb_Chr15g0087411 Lupinus albus HOM05D004695 ORTHO05D005372 4.6e-07 58.2 97 38.1
Medtr2g022610 Medicago truncatula HOM05D004695 ORTHO05D005372 4.6e-07 58.2 97 38.1
PGSC0003DMG400008993 Solanum tuberosum HOM05D004695 ORTHO05D005372 4.6e-07 58.2 86 44.2
FAN07G1591 Fragaria x ananassa HOM05D004695 ORTHO05D005372 6.0e-07 57.8 89 47.2
Gohir.A02G135400 Gossypium hirsutum HOM05D004695 ORTHO05D005372 6.0e-07 57.8 86 46.5
Glyma.15G105500 Glycine max HOM05D004695 ORTHO05D005372 7.8e-07 57.4 86 43.0
HanXRQChr10g0311131 Helianthus annuus HOM05D004695 ORTHO05D005372 7.8e-07 57.4 101 40.6
MBI19_g46840_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 7.8e-07 57.4 87 49.4
Sabra08G0157600 Salix brachista HOM05D004695 ORTHO05D005372 1.0e-06 57.0 91 37.4
Nn1g02189 Nelumbo nucifera HOM05D004695 ORTHO05D005372 1.3e-06 56.6 88 43.2
MBI19_g16320_MAGBIO Magnolia biondii HOM05D004695 ORTHO05D005372 1.7e-06 56.2 87 48.3
Cc03_g03270 Coffea canephora HOM05D004695 ORTHO05D005372 2.3e-06 55.8 94 44.7
Phvul.006G151900 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 2.3e-06 55.8 86 44.2
VMungo0540G1940 Vigna mungo HOM05D004695 ORTHO05D005372 2.3e-06 55.8 86 43.0
MSTRG.10006 Avicennia marina HOM05D004695 ORTHO05D005372 3.0e-06 55.5 72 47.2
Haze_00944 Corylus avellana HOM05D004695 ORTHO05D005372 3.0e-06 55.5 87 43.7
Manes.15G024700 Manihot esculenta HOM05D004695 ORTHO05D005372 3.0e-06 55.5 95 44.2
Phvul.003G091400 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 3.0e-06 55.5 95 38.9
Potri.008G204100 Populus trichocarpa HOM05D004695 ORTHO05D005372 3.0e-06 55.5 91 39.6
TPR.G36993 Trifolium pratense HOM05D004695 ORTHO05D005372 3.0e-06 55.5 97 35.1
Oeu042788.1 Olea europaea HOM05D004695 ORTHO05D005372 3.9e-06 55.1 93 43.0
TAR636G3528 Trochodendron aralioides HOM05D004695 ORTHO05D005372 3.9e-06 55.1 84 44.0
Duzib147G1031 Durio zibethinus HOM05D004695 ORTHO05D005372 5.1e-06 54.7 92 41.3
Peaxi162Scf00134g02026 Petunia axillaris HOM05D004695 ORTHO05D005372 5.1e-06 54.7 86 45.3
HanXRQChr12g0359551 Helianthus annuus HOM05D004695 ORTHO05D005372 6.6e-06 54.3 91 42.9
arahy.Tifrunner.gnm1.ann1.NGDM9G Arachis hypogaea HOM05D004695 ORTHO05D005372 8.6e-06 53.9 98 40.8
arahy.Tifrunner.gnm1.ann1.P3SWUI Arachis hypogaea HOM05D004695 ORTHO05D005372 8.6e-06 53.9 98 40.8
Duzib187G0357 Durio zibethinus HOM05D004695 ORTHO05D005372 8.6e-06 53.9 83 47.0
Lj4g0022767 Lotus japonicus HOM05D004695 ORTHO05D005372 8.6e-06 53.9 97 38.1
Lalb_Chr18g0056181 Lupinus albus HOM05D004695 ORTHO05D005372 8.6e-06 53.9 84 40.5


User provided reference genes

Program Settings