Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15291 Striga asiatica HOM05D005221 ORTHO05D006355 5.5e-102 374.4 202 100.0
SGA_v2.0_scaffold237G43792 Striga asiatica HOM05D005221 ORTHO05D006355 1.4e-36 157.1 223 48.9
Oeu037551.1 Olea europaea HOM05D005221 ORTHO05D006355 6.9e-28 128.3 244 43.9
QL06p003360 Quercus lobata HOM05D005221 ORTHO05D006355 3.4e-27 125.9 244 41.0
Prupe.1G155500 Prunus persica HOM05D005221 ORTHO05D006355 8.4e-26 121.3 247 41.7
Cfa015617 Carpinus fangiana HOM05D005221 ORTHO05D006355 3.2e-25 119.4 239 40.6
Manes.03G181200 Manihot esculenta HOM05D005221 ORTHO05D006355 7.1e-25 118.2 244 39.8
RcHm_v2.0_Chr4g0416801 Rosa chinensis HOM05D005221 ORTHO05D006355 7.1e-25 118.2 244 38.1
Lj5g0028012 Lotus japonicus HOM05D005221 ORTHO05D006355 9.3e-25 117.9 254 38.2
FAN12G4146 Fragaria x ananassa HOM05D005221 ORTHO05D006355 1.6e-24 117.1 250 40.0
Potri.010G090700 Populus trichocarpa HOM05D005221 ORTHO05D006355 1.6e-24 117.1 243 41.2
Duzib151G0158 Durio zibethinus HOM05D005221 ORTHO05D006355 3.5e-24 115.9 253 38.3
FAN07G2107 Fragaria x ananassa HOM05D005221 ORTHO05D006355 4.6e-24 115.5 252 40.1
FAN22G0945 Fragaria x ananassa HOM05D005221 ORTHO05D006355 6.0e-24 115.2 249 39.4
TPR.G5529 Trifolium pratense HOM05D005221 ORTHO05D006355 7.9e-24 114.8 252 38.5
TWI53G0458 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 7.9e-24 114.8 246 39.8
Sabra08G0114400 Salix brachista HOM05D005221 ORTHO05D006355 1.0e-23 114.4 236 39.0
Potri.008G150300 Populus trichocarpa HOM05D005221 ORTHO05D006355 2.3e-23 113.2 243 39.1
MSTRG.21844 Avicennia marina HOM05D005221 ORTHO05D006355 3.0e-23 112.8 241 39.8
FvH4_4g15060 Fragaria vesca HOM05D005221 ORTHO05D006355 5.1e-23 112.1 248 38.7
Cc03_g03470 Coffea canephora HOM05D005221 ORTHO05D006355 1.1e-22 110.9 250 38.4
Medtr1g104840 Medicago truncatula HOM05D005221 ORTHO05D006355 1.1e-22 110.9 253 36.0
Cpa.g.sc8.322 Carica papaya HOM05D005221 ORTHO05D006355 1.9e-22 110.2 256 38.3
Ca_10924_v3 Cicer arietinum L. HOM05D005221 ORTHO05D006355 1.9e-22 110.2 265 37.4
MD16G1188800 Malus domestica HOM05D005221 ORTHO05D006355 1.9e-22 110.2 246 40.7
Thecc.04G227300 Theobroma cacao HOM05D005221 ORTHO05D006355 1.9e-22 110.2 241 38.2
Manes.15G026700 Manihot esculenta HOM05D005221 ORTHO05D006355 3.3e-22 109.4 245 39.6
Sabra10G0052800 Salix brachista HOM05D005221 ORTHO05D006355 3.3e-22 109.4 235 40.0
PGSC0003DMG400011822 Solanum tuberosum HOM05D005221 ORTHO05D006355 3.3e-22 109.4 218 36.2
Duzib052G0196 Durio zibethinus HOM05D005221 ORTHO05D006355 5.6e-22 108.6 245 33.9
Sed0008919 Sechium edule HOM05D005221 ORTHO05D006355 5.6e-22 108.6 233 38.2
Sopen06g019400 Solanum pennellii HOM05D005221 ORTHO05D006355 7.4e-22 108.2 231 35.5
Solyc06g054280.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 9.6e-22 107.8 231 35.5
CAN.G873.5 Capsicum annuum HOM05D005221 ORTHO05D006355 4.8e-21 105.5 239 34.7
Peaxi162Scf00642g00022 Petunia axillaris HOM05D005221 ORTHO05D006355 6.2e-21 105.1 238 38.7
CSS0023930 Camellia sinensis var. sinensis HOM05D005221 ORTHO05D006355 1.4e-20 104.0 240 36.2
TWI09G0254 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 1.4e-20 104.0 243 37.4
Phvul.007G054700 Phaseolus vulgaris HOM05D005221 ORTHO05D006355 2.4e-20 103.2 255 35.3
Sed0012211 Sechium edule HOM05D005221 ORTHO05D006355 2.4e-20 103.2 234 37.2
TAR362G0899 Trochodendron aralioides HOM05D005221 ORTHO05D006355 2.4e-20 103.2 243 37.9
COL.COLO4_06196 Corchorus olitorius HOM05D005221 ORTHO05D006355 3.1e-20 102.8 254 36.2
MELO3C014491.2 Cucumis melo HOM05D005221 ORTHO05D006355 3.1e-20 102.8 238 36.6
MD13G1188400 Malus domestica HOM05D005221 ORTHO05D006355 4.0e-20 102.4 242 37.2
CAN.G668.8 Capsicum annuum HOM05D005221 ORTHO05D006355 9.0e-20 101.3 240 35.4
CiPaw.02G095300 Carya illinoinensis HOM05D005221 ORTHO05D006355 9.0e-20 101.3 231 35.5
Peaxi162Scf00437g00052 Petunia axillaris HOM05D005221 ORTHO05D006355 9.0e-20 101.3 249 36.5
Gohir.D09G216800 Gossypium hirsutum HOM05D005221 ORTHO05D006355 1.5e-19 100.5 253 35.6
VMungo0720G0147 Vigna mungo HOM05D005221 ORTHO05D006355 1.5e-19 100.5 255 35.7
Ciclev10005615m.g Citrus clementina HOM05D005221 ORTHO05D006355 2.6e-19 99.8 278 34.2
Glyma.10G249900 Glycine max HOM05D005221 ORTHO05D006355 2.6e-19 99.8 259 35.5
Nitab4.5_0000260g0100 Nicotiana tabacum HOM05D005221 ORTHO05D006355 2.6e-19 99.8 241 34.9
Glyma.20G143700 Glycine max HOM05D005221 ORTHO05D006355 3.4e-19 99.4 256 35.9
Oeu029026.1 Olea europaea HOM05D005221 ORTHO05D006355 3.4e-19 99.4 125 47.2
Nn1g02242 Nelumbo nucifera HOM05D005221 ORTHO05D006355 4.5e-19 99.0 253 37.2
Actinidia23488 Actinidia chinensis HOM05D005221 ORTHO05D006355 5.8e-19 98.6 217 33.6
Duzib212G0790 Durio zibethinus HOM05D005221 ORTHO05D006355 7.6e-19 98.2 243 36.6
Gorai.006G237300 Gossypium raimondii HOM05D005221 ORTHO05D006355 7.6e-19 98.2 253 35.2
Nitab4.5_0001545g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 7.6e-19 98.2 249 35.7
Gohir.A09G214300 Gossypium hirsutum HOM05D005221 ORTHO05D006355 1.0e-18 97.8 253 35.2
Dinv38425 Davidia involucrata HOM05D005221 ORTHO05D006355 2.2e-18 96.7 169 43.8
Migut.N00171 Erythranthe guttata HOM05D005221 ORTHO05D006355 2.2e-18 96.7 242 36.4
Nn4g26263 Nelumbo nucifera HOM05D005221 ORTHO05D006355 2.9e-18 96.3 236 36.4
Sc19g0004310 Simmondsia chinensis HOM05D005221 ORTHO05D006355 2.9e-18 96.3 256 35.5
Solyc09g075740.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 3.8e-18 95.9 230 35.2
Lalb_Chr06g0160581 Lupinus albus HOM05D005221 ORTHO05D006355 6.5e-18 95.1 248 34.7
Aqoxy2G03348 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 1.1e-17 94.4 243 34.2
Sopen09g030550 Solanum pennellii HOM05D005221 ORTHO05D006355 1.1e-17 94.4 233 36.5
PGSC0003DMG400031851 Solanum tuberosum HOM05D005221 ORTHO05D006355 1.1e-17 94.4 225 36.0
ClCG06G006000 Citrullus lanatus HOM05D005221 ORTHO05D006355 1.4e-17 94.0 232 36.2
DCAR_030618 Daucus carota HOM05D005221 ORTHO05D006355 1.4e-17 94.0 234 33.8
DCAR_024599 Daucus carota HOM05D005221 ORTHO05D006355 3.2e-17 92.8 231 36.4
Lj3P740T18 Lonicera japonica HOM05D005221 ORTHO05D006355 3.2e-17 92.8 245 36.3
CiPaw.01G163700 Carya illinoinensis HOM05D005221 ORTHO05D006355 4.2e-17 92.4 222 37.8
CsaV3_6G038280 Cucumis sativus L. HOM05D005221 ORTHO05D006355 7.1e-17 91.7 238 34.9
Nitab4.5_0000321g0080 Nicotiana tabacum HOM05D005221 ORTHO05D006355 1.6e-16 90.5 235 34.5
MSTRG.4014 Avicennia marina HOM05D005221 ORTHO05D006355 2.1e-16 90.1 235 38.3
DCAR_002395 Daucus carota HOM05D005221 ORTHO05D006355 3.5e-16 89.4 225 36.0
Sc13g0004240 Simmondsia chinensis HOM05D005221 ORTHO05D006355 4.6e-16 89.0 271 34.7
SGA_v2.0_scaffold10G05107 Striga asiatica HOM05D005221 ORTHO05D006355 6.0e-16 88.6 225 36.4
HanXRQChr10g0296561 Helianthus annuus HOM05D005221 ORTHO05D006355 3.0e-15 86.3 226 34.1
CANSAT78G1299 Cannabis sativa HOM05D005221 ORTHO05D006355 1.5e-14 84.0 129 51.2
FAN17G2349 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.5e-14 83.2 242 33.1
THA.LOC104802759 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 9.6e-14 81.3 233 34.3
PSO302G0248 Papaver somniferum HOM05D005221 ORTHO05D006355 1.6e-13 80.5 127 37.8
EL10As3g23360 Beta vulgaris HOM05D005221 ORTHO05D006355 2.1e-13 80.1 135 45.9
Rhsim04G0205100 Rhododendron simsii HOM05D005221 ORTHO05D006355 2.1e-13 80.1 243 31.7
ECA234G2268 Erigeron canadensis HOM05D005221 ORTHO05D006355 4.8e-13 79.0 243 32.5
Lj6P597T84 Lonicera japonica HOM05D005221 ORTHO05D006355 6.2e-13 78.6 112 50.0
PGR142G0441 Punica granatum HOM05D005221 ORTHO05D006355 1.4e-12 77.4 287 32.4
Lsat_1_v5_gn_5_148500 Lactuca sativa HOM05D005221 ORTHO05D006355 2.4e-12 76.6 225 33.8
TAR636G2071 Trochodendron aralioides HOM05D002203 ORTHO05D002647 3.1e-12 76.3 152 35.5
PGR004G1499 Punica granatum HOM05D005221 ORTHO05D006355 5.3e-12 75.5 129 41.1
MBI17_g31753_MAGBIO Magnolia biondii HOM05D005221 ORTHO05D006355 6.9e-12 75.1 213 31.5
BcaC09g47869 Brassica carinata HOM05D005221 ORTHO05D006355 1.5e-11 73.9 194 30.9
A03p09440 Brassica napus HOM05D005221 ORTHO05D006355 2.0e-11 73.6 120 45.8
BolC1t05645H Brassica oleracea HOM05D005221 ORTHO05D006355 4.5e-11 72.4 129 38.0
BcaB01g04866 Brassica carinata HOM05D005221 ORTHO05D006355 1.7e-10 70.5 120 43.3
BraA01t04457Z Brassica rapa HOM05D005221 ORTHO05D006355 2.2e-10 70.1 191 30.9
THA.LOC104818779 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 2.9e-10 69.7 128 39.8
AT3G05980 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 5.0e-10 68.9 241 29.9
Aqoxy5G00503 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 6.5e-10 68.6 125 43.2
Aa31LG5G16450 Aethionema arabicum HOM05D005221 ORTHO05D006355 1.1e-09 67.8 128 41.4
Eucgr.B01092 Eucalyptus grandis HOM05D005221 ORTHO05D006355 1.1e-09 67.8 129 41.9
BraA03t10262Z Brassica rapa HOM05D005221 ORTHO05D006355 1.9e-09 67.0 120 41.7
AL3G16790 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 2.5e-09 66.6 245 28.6
BolC3t13571H Brassica oleracea HOM05D005221 ORTHO05D006355 3.2e-09 66.2 112 42.9
Nitab4.5_0007609g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 3.2e-09 66.2 150 31.3
A05p42050 Brassica napus HOM05D005221 ORTHO05D006355 4.2e-09 65.9 238 28.2
Carub.0003s0539 Capsella rubella HOM05D005221 ORTHO05D006355 4.2e-09 65.9 243 31.7
HanXRQChr04g0110301 Helianthus annuus HOM05D005221 ORTHO05D006355 7.1e-09 65.1 219 30.1
A10p20340 Brassica napus HOM05D005221 ORTHO05D006355 2.1e-08 63.5 122 41.0
BolC9t58548H Brassica oleracea HOM05D005221 ORTHO05D006355 2.1e-08 63.5 122 41.0
BraA10t44105Z Brassica rapa HOM05D005221 ORTHO05D006355 2.1e-08 63.5 122 41.0
BcaC04g18576 Brassica carinata HOM05D005221 ORTHO05D006355 2.7e-08 63.2 122 41.0
C09p56940 Brassica napus HOM05D005221 ORTHO05D006355 2.7e-08 63.2 122 41.0
CARHR080490 Cardamine hirsuta HOM05D005221 ORTHO05D006355 3.5e-08 62.8 119 38.7
BraA05t22925Z Brassica rapa HOM05D005221 ORTHO05D006355 4.6e-08 62.4 119 37.8
AT5G19340 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 6.1e-08 62.0 118 44.1
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 7.9e-08 61.6 223 30.5
Atru.chr4.2515 Acer truncatum HOM05D005221 ORTHO05D006355 1.0e-07 61.2 222 35.6
C03p11020 Brassica napus HOM05D005221 ORTHO05D006355 1.0e-07 61.2 120 41.7
Ah.04g154490 Amaranthus hybridus HOM05D005221 ORTHO05D006355 1.3e-07 60.8 120 43.3
BcaC05g30072 Brassica carinata HOM05D005221 ORTHO05D006355 1.8e-07 60.5 122 37.7
Thhalv10016073m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.8e-07 60.5 115 42.6
Thhalv10021379m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 2.3e-07 60.1 120 39.2
C05p61280 Brassica napus HOM05D005221 ORTHO05D006355 3.9e-07 59.3 119 37.0
BolC5t34787H Brassica oleracea HOM05D005221 ORTHO05D006355 3.9e-07 59.3 119 37.0
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 5.1e-07 58.9 147 29.3
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea HOM05D005221 ORTHO05D006355 8.7e-07 58.2 45 64.4
Sp3g04920 Schrenkiella parvula HOM05D005221 ORTHO05D006355 1.1e-06 57.8 122 39.3
Psat6g208720 Pisum sativum HOM05D005221 ORTHO05D006355 1.9e-06 57.0 82 51.2
BcaB01g05141 Brassica carinata HOM05D005221 ORTHO05D006355 2.5e-06 56.6 95 45.3
BcaNung07026 Brassica carinata HOM05D005221 ORTHO05D006355 4.3e-06 55.8 35 62.9
AL6G30830 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 7.4e-06 55.1 115 42.6


User provided reference genes

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