Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15275 Striga asiatica HOM05D010223 ORTHO05D012491 0.0e+00 1125.2 599 100.0
SGA_v2.0_scaffold240G44168 Striga asiatica HOM05D010223 ORTHO05D012491 4.1e-177 625.5 602 56.3
SGA_v2.0_scaffold354G49734 Striga asiatica HOM05D010223 ORTHO05D012491 3.6e-173 612.5 745 50.6
SGA_v2.0_scaffold449G51797 Striga asiatica HOM05D010223 ORTHO05D000048 3.7e-61 240.4 225 70.2
Medtr7g015420 Medicago truncatula HOM05D000041 ORTHO05D000061 1.4e-31 142.1 416 28.8
THA.LOC104825587 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.8e-28 131.7 317 25.6
THA.LOC104814124 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 5.9e-27 126.7 341 25.8
THA.LOC104824424 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 7.7e-27 126.3 420 24.5
TPR.G11079 Trifolium pratense HOM05D010223 ORTHO05D012491 3.3e-25 120.9 193 31.6
Lsat_1_v5_gn_0_32321 Lactuca sativa HOM05D010223 ORTHO05D012491 3.0e-23 114.4 351 26.8
THA.LOC104801502 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 2.0e-22 111.7 424 22.9
THA.LOC104804877 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.6e-19 102.1 266 25.2
THA.LOC104821145 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.6e-19 102.1 266 25.2
THA.LOC104805966 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 7.8e-19 99.8 247 24.7
THA.LOC104818135 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 1.7e-18 98.6 271 24.7
THA.LOC104816123 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 2.5e-17 94.7 246 23.6
THA.LOC104820443 Tarenaya hassleriana HOM05D010223 ORTHO05D012491 2.5e-17 94.7 426 21.1
PGR083G0991 Punica granatum HOM05D010223 ORTHO05D012491 3.1e-15 87.8 468 23.5
PGR042G2830 Punica granatum HOM05D010223 ORTHO05D012491 3.2e-12 77.8 360 25.0
ECA232G4467 Erigeron canadensis HOM05D003069 ORTHO05D016972 3.5e-11 74.3 224 27.2
ECA232G2178 Erigeron canadensis HOM05D003069 ORTHO05D016972 1.7e-10 72.0 226 25.7
ECA232G1307 Erigeron canadensis HOM05D003069 ORTHO05D000002 2.5e-09 68.2 228 26.8
TPR.G8959 Trifolium pratense HOM05D030604 ORTHO05D030693 3.6e-08 64.3 175 29.7
Ciclev10005136m.g Citrus clementina HOM05D017056 ORTHO05D019029 4.4e-06 57.4 305 23.3
TPR.G35070 Trifolium pratense HOM05D030604 ORTHO05D030693 5.8e-06 57.0 141 32.6


User provided reference genes

Program Settings