Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15258 Striga asiatica HOM05D004490 ORTHO05D005353 2.4e-63 245.4 123 100.0
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 3.1e-15 85.5 144 43.1
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 2.5e-12 75.9 144 39.6
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 8.8e-10 67.4 127 40.9
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 2.6e-09 65.9 144 37.5
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 7.4e-09 64.3 143 37.8
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 1.7e-08 63.2 142 37.3
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 2.2e-08 62.8 141 36.9
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 6.3e-08 61.2 143 35.0
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 8.2e-08 60.8 124 38.7
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 8.2e-08 60.8 125 39.2
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 1.1e-07 60.5 143 35.7
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 1.8e-07 59.7 145 33.1
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 1.8e-07 59.7 125 37.6
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.8e-07 59.7 144 36.1
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 2.4e-07 59.3 140 36.4
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 4.1e-07 58.5 145 33.8
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 4.1e-07 58.5 146 36.3
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 5.3e-07 58.2 144 36.1
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 5.3e-07 58.2 143 35.7
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 5.3e-07 58.2 131 35.9
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 5.3e-07 58.2 140 37.1
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 9.1e-07 57.4 143 35.7
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 9.1e-07 57.4 143 35.7
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.2e-06 57.0 144 35.4
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 1.5e-06 56.6 143 35.0
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 1.5e-06 56.6 125 36.8
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 1.5e-06 56.6 140 36.4
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.5e-06 56.6 144 34.7
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 2.6e-06 55.8 124 38.7
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 2.6e-06 55.8 143 35.0
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 2.6e-06 55.8 143 35.0
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 3.4e-06 55.5 143 32.2
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 4.5e-06 55.1 140 35.0
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 5.9e-06 54.7 140 35.0
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 5.9e-06 54.7 144 35.4
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 7.7e-06 54.3 140 35.7
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 7.7e-06 54.3 143 33.6
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 7.7e-06 54.3 126 38.1
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 7.7e-06 54.3 126 38.1


User provided reference genes

Program Settings