Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 7.4e-81 303.9 164 100.0
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.7e-37 159.8 177 59.3
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 4.3e-36 155.2 175 56.0
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 4.3e-36 155.2 179 57.0
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 4.3e-36 155.2 179 57.0
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 4.3e-36 155.2 179 57.0
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 1.4e-31 140.2 168 54.8
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.9e-31 139.8 117 66.7
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.4e-31 139.4 178 55.1
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 1.6e-30 136.7 119 63.0
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.1e-30 136.3 148 58.8
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 4.6e-30 135.2 118 62.7
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 7.8e-30 134.4 114 64.9
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.0e-29 134.0 102 70.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.0e-29 134.0 87 83.9
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.7e-29 133.3 162 53.1
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.7e-29 133.3 175 49.1
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.3e-29 132.9 86 83.7
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 2.3e-29 132.9 86 83.7
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 2.3e-29 132.9 113 67.3
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 3.0e-29 132.5 154 54.5
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.0e-29 132.5 112 64.3
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 3.0e-29 132.5 128 60.2
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 3.0e-29 132.5 173 53.8
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 3.9e-29 132.1 91 76.9
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 3.9e-29 132.1 174 50.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 5.0e-29 131.7 191 47.6
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 6.6e-29 131.3 135 54.1
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 6.6e-29 131.3 123 58.5
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 8.6e-29 131.0 172 49.4
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.1e-28 130.6 164 55.5
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.5e-28 130.2 127 64.6
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.9e-28 129.8 88 78.4
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.9e-28 129.8 90 78.9
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.3e-28 129.0 163 51.5
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.3e-28 129.0 114 63.2
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.3e-28 129.0 159 51.6
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.3e-28 128.6 114 63.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 4.3e-28 128.6 163 54.6
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 5.6e-28 128.3 178 48.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.3e-28 127.9 159 52.8
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 9.5e-28 127.5 138 56.5
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 1.6e-27 126.7 158 48.7
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.6e-27 126.7 172 51.7
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.6e-27 126.7 103 68.0
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.6e-27 126.7 164 51.2
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 2.1e-27 126.3 187 48.1
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 3.6e-27 125.6 156 51.9
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 3.6e-27 125.6 157 51.0
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.6e-27 125.6 122 64.8
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 4.7e-27 125.2 90 74.4
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 4.7e-27 125.2 178 47.8
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 4.7e-27 125.2 130 57.7
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 6.2e-27 124.8 156 51.3
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 6.2e-27 124.8 157 52.2
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 6.2e-27 124.8 156 51.3
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 8.1e-27 124.4 181 46.4
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.1e-26 124.0 82 79.3
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.8e-26 123.2 176 47.7
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.8e-26 123.2 89 71.9
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 3.1e-26 122.5 97 69.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.1e-26 122.5 126 59.5
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 5.2e-26 121.7 125 59.2
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 6.8e-26 121.3 178 48.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 8.9e-26 120.9 94 72.3
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 8.9e-26 120.9 150 50.7
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.2e-25 120.6 166 52.4
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.5e-25 120.2 154 48.7
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 4.4e-25 118.6 91 72.5
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 4.4e-25 118.6 173 49.1
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 7.5e-25 117.9 127 58.3
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 7.5e-25 117.9 75 85.3
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 7.5e-25 117.9 157 50.3
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 1.3e-24 117.1 157 47.8
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 2.9e-24 115.9 93 68.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 3.7e-24 115.5 83 71.1
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 3.7e-24 115.5 123 55.3
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 4.9e-24 115.2 151 53.6
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.9e-24 115.2 157 49.0
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.9e-24 115.2 151 53.6
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 4.9e-24 115.2 170 45.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 6.4e-24 114.8 122 54.9
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 8.3e-24 114.4 149 51.7
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.1e-23 114.0 96 63.5
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 2.4e-23 112.8 138 51.4
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 5.4e-23 111.7 105 61.0
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 7.1e-23 111.3 71 80.3
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.2e-22 110.5 142 55.6
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.0e-21 107.5 151 49.7
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.9e-21 105.5 164 47.0
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 5.1e-21 105.1 98 58.2
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 6.6e-21 104.8 67 80.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 5.6e-20 101.7 134 48.5
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 7.3e-20 101.3 76 73.7
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.1e-18 97.4 135 43.7
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.4e-18 97.1 174 42.0
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 4.0e-18 95.5 81 64.2
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.5e-17 93.6 60 75.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.5e-14 82.4 86 53.5
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 3.5e-14 82.4 114 46.5
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 3.5e-14 82.4 64 67.2
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.2e-11 73.9 56 67.9
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 2.1e-11 73.2 143 39.2
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 3.6e-11 72.4 143 36.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 8.4e-08 61.2 106 38.7
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.1e-07 60.8 63 57.1


User provided reference genes

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