Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold39G15167 Striga asiatica HOM05D007874 ORTHO05D009614 3.0e-65 251.9 148 100.0
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 2.7e-13 79.3 131 46.6
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 1.1e-11 73.9 130 47.7
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 2.5e-11 72.8 114 39.5
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 2.8e-10 69.3 146 39.0
Oeu039508.1 Olea europaea HOM05D007874 ORTHO05D009614 2.8e-10 69.3 102 54.9
Peaxi162Scf00159g00054 Petunia axillaris HOM05D007874 ORTHO05D009614 1.8e-09 66.6 134 37.3
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 5.2e-09 65.1 112 39.3
SalBow8G5073 Salvia bowleyana HOM05D007874 ORTHO05D009614 4.4e-08 62.0 105 44.8
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 5.8e-08 61.6 109 42.2
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 2.9e-07 59.3 133 33.1
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 3.8e-07 58.9 142 38.0
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 4.9e-07 58.5 141 33.3
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 6.4e-07 58.2 136 38.2
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 6.4e-07 58.2 121 33.1
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 4.2e-06 55.5 126 37.3
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 5.4e-06 55.1 129 34.9
MSTRG.13588 Avicennia marina HOM05D007874 ORTHO05D009614 7.1e-06 54.7 96 46.9
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 7.1e-06 54.7 146 34.2
Migut.L00989 Erythranthe guttata HOM05D007874 ORTHO05D009614 7.1e-06 54.7 147 39.5


User provided reference genes

Program Settings