Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 3.5e-150 535.0 293 100.0
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 1.6e-41 174.1 286 44.8
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-34 151.0 290 38.6
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-34 151.0 290 38.6
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 1.4e-29 134.4 229 41.9
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.2e-28 131.3 292 37.7
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.2e-28 131.3 236 41.5
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 2.9e-27 126.7 213 41.3
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 5.0e-27 125.9 180 46.1
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 8.4e-27 125.2 180 48.3
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 8.4e-27 125.2 235 40.0
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 6.1e-25 119.0 178 41.6
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 7.9e-25 118.6 182 46.2
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 1.3e-24 117.9 182 44.0
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 3.9e-24 116.3 181 43.6
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 5.1e-24 115.9 183 43.2
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 6.7e-24 115.5 217 39.6
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 6.7e-24 115.5 281 35.9
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.5e-23 114.4 180 42.2
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 3.3e-23 113.2 184 41.8
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 5.7e-23 112.5 179 40.2
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 7.4e-23 112.1 179 40.2
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 7.4e-23 112.1 179 40.8
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 9.7e-23 111.7 182 39.6
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 9.7e-23 111.7 205 42.0
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.2e-22 110.5 183 41.5
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 2.8e-22 110.2 179 40.2
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.7e-22 109.8 180 43.9
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 3.7e-22 109.8 183 44.3
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 3.7e-22 109.8 183 40.4
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 4.8e-22 109.4 278 34.5
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 8.2e-22 108.6 180 38.3
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 1.4e-21 107.8 179 41.9
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.4e-21 107.1 184 41.8
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 2.4e-21 107.1 233 35.6
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 2.4e-21 107.1 179 38.5
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 5.3e-21 105.9 179 39.7
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 5.3e-21 105.9 181 37.6
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 9.0e-21 105.1 184 41.3
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 9.0e-21 105.1 179 40.8
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 1.2e-20 104.8 183 39.3
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.2e-20 104.8 182 40.1
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.5e-20 104.4 207 34.8
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 1.5e-20 104.4 179 38.0
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 2.0e-20 104.0 182 38.5
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 2.0e-20 104.0 186 39.2
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 3.4e-20 103.2 184 40.2
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 4.5e-20 102.8 207 34.3
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 4.5e-20 102.8 189 38.6
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 5.9e-20 102.4 181 37.0
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 7.7e-20 102.1 188 39.4
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.0e-19 101.7 187 38.5
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 1.3e-19 101.3 179 38.5
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 1.7e-19 100.9 183 39.3
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 2.2e-19 100.5 180 41.7
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 2.9e-19 100.1 184 40.2
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 3.8e-19 99.8 173 38.7
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 5.0e-19 99.4 179 38.5
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 6.5e-19 99.0 184 40.2
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 6.5e-19 99.0 180 38.9
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 9.4e-18 95.1 186 38.2
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 6.1e-17 92.4 179 38.0
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 7.9e-17 92.0 180 35.0
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.0e-16 91.7 178 34.3
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.3e-16 90.5 183 39.3
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 5.1e-16 89.4 182 38.5
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 1.1e-15 88.2 180 37.2
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 1.5e-15 87.8 179 35.2
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 1.5e-15 87.8 180 36.1
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 1.5e-15 87.8 183 38.3
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 3.3e-15 86.7 178 37.1
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 4.3e-15 86.3 191 37.2
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 5.7e-15 85.9 179 38.5
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 7.4e-15 85.5 147 42.2
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 7.4e-15 85.5 187 38.0
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 9.7e-15 85.1 177 36.7
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 3.7e-14 83.2 174 31.6
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 3.7e-14 83.2 180 35.0
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 3.7e-14 83.2 140 40.0
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 4.8e-14 82.8 131 42.0
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 6.3e-14 82.4 182 33.5
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-13 81.3 182 31.3
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 1.8e-13 80.9 189 32.3
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.4e-13 80.5 122 44.3
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 5.3e-13 79.3 157 37.6
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 6.9e-13 79.0 182 35.2
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 6.9e-13 79.0 184 33.7
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 6.9e-13 79.0 184 33.7
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 9.1e-13 78.6 223 30.5
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 9.1e-13 78.6 179 33.5
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 9.1e-13 78.6 182 34.6
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 9.1e-13 78.6 193 35.8
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 1.2e-12 78.2 240 27.5
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 4.5e-12 76.3 197 34.5
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 7.7e-12 75.5 184 33.7
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 1.0e-11 75.1 189 34.9
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 1.3e-11 74.7 189 35.4
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 1.7e-11 74.3 183 34.4
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 1.7e-11 74.3 183 35.0
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 1.7e-11 74.3 186 34.9
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 2.2e-11 73.9 185 33.0
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 2.9e-11 73.6 186 31.7
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 6.5e-11 72.4 85 50.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 1.9e-10 70.9 178 33.7
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.9e-10 70.9 148 41.9
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 1.9e-10 70.9 191 33.5
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 3.2e-10 70.1 212 31.6
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 3.2e-10 70.1 182 30.2
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 3.2e-10 70.1 179 32.4
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 4.2e-10 69.7 200 29.5
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 5.5e-10 69.3 191 31.4
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 7.2e-10 68.9 167 32.3
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 7.2e-10 68.9 188 31.4
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 9.4e-10 68.6 180 28.9
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 9.4e-10 68.6 177 29.9
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.2e-09 68.2 147 38.8
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 2.1e-09 67.4 165 29.1
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.7e-09 67.0 186 31.7
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 2.7e-09 67.0 150 35.3
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 3.6e-09 66.6 219 30.6
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 7.9e-09 65.5 187 32.1
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 7.9e-09 65.5 68 51.5
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 7.9e-09 65.5 193 29.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-08 64.3 195 29.2
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.8e-08 64.3 174 29.9
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 3.9e-08 63.2 195 29.2
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 1.1e-07 61.6 127 34.6
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 1.1e-07 61.6 187 32.1
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.5e-07 61.2 131 34.4
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 2.0e-07 60.8 185 32.4
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 3.3e-07 60.1 231 28.6
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 5.7e-07 59.3 181 32.0
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 4.8e-06 56.2 171 28.7
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 8.2e-06 55.5 181 30.4


User provided reference genes

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