Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 5.6e-69 264.2 140 100.0
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.3e-46 189.1 140 72.9
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.1e-43 180.3 141 70.2
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.8e-43 179.5 141 68.1
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 3.5e-39 165.2 141 65.2
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.0e-38 162.2 143 62.2
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 5.1e-38 161.4 144 61.1
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.8e-36 155.6 137 64.2
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 3.6e-36 155.2 139 64.7
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.4e-35 153.3 143 64.3
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.8e-35 152.9 132 66.7
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 6.9e-35 151.0 141 63.8
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 6.9e-35 151.0 121 69.4
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 6.9e-35 151.0 147 59.9
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 9.0e-35 150.6 104 73.1
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.2e-34 150.2 111 71.2
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.2e-34 150.2 132 66.7
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 2.0e-34 149.4 123 65.9
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.0e-34 149.4 144 65.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 2.6e-34 149.1 144 61.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 2.6e-34 149.1 131 64.9
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 3.4e-34 148.7 139 64.0
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 4.5e-34 148.3 148 58.8
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.8e-34 147.9 143 62.2
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 7.6e-34 147.5 113 71.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 9.9e-34 147.1 102 75.5
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.3e-33 146.7 104 75.0
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 1.7e-33 146.4 111 67.6
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.7e-33 146.4 143 64.3
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 2.9e-33 145.6 140 61.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 3.8e-33 145.2 106 72.6
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 3.8e-33 145.2 148 56.1
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 4.9e-33 144.8 111 73.9
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 6.4e-33 144.4 105 74.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 6.4e-33 144.4 129 64.3
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 8.4e-33 144.1 144 59.0
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.1e-32 143.7 104 73.1
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.4e-32 143.3 135 63.0
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.9e-32 142.9 140 59.3
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.9e-32 142.9 105 71.4
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.9e-32 142.9 171 53.2
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.9e-32 142.9 144 59.0
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.9e-32 142.9 146 60.3
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.4e-32 142.5 104 72.1
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.4e-32 142.5 145 59.3
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 3.2e-32 142.1 146 61.6
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 3.2e-32 142.1 135 63.0
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 3.2e-32 142.1 140 57.9
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 5.4e-32 141.4 111 71.2
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.1e-32 141.0 152 59.9
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 7.1e-32 141.0 139 60.4
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.2e-31 140.2 105 72.4
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.6e-31 139.8 138 58.0
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.1e-31 139.4 121 62.0
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.1e-31 139.4 110 68.2
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.7e-31 139.0 110 69.1
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 2.7e-31 139.0 107 70.1
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.5e-31 138.7 112 66.1
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 3.5e-31 138.7 138 56.5
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.0e-31 137.9 133 61.7
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.0e-31 137.9 112 66.1
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 6.0e-31 137.9 104 72.1
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 6.0e-31 137.9 145 57.9
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 7.9e-31 137.5 144 60.4
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.0e-30 137.1 102 70.6
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.3e-30 136.7 138 60.1
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.8e-30 136.3 112 65.2
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.1e-29 133.7 96 70.8
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.5e-29 133.3 105 69.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.5e-29 133.3 102 67.6
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.5e-29 132.5 89 74.2
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.3e-29 132.1 135 56.3
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 5.6e-29 131.3 107 66.4
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 7.4e-29 131.0 106 67.0
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.6e-28 129.8 109 68.8
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.6e-28 129.8 109 68.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.6e-28 129.8 109 68.8
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.6e-28 129.8 108 64.8
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.1e-28 129.4 112 67.0
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.1e-28 129.4 112 67.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 2.1e-28 129.4 144 54.9
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.8e-28 129.0 110 67.3
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 4.8e-28 128.3 107 67.3
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 4.8e-28 128.3 111 66.7
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 6.2e-28 127.9 112 61.6
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 3.1e-27 125.6 131 61.8
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 4.0e-27 125.2 81 75.3
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 5.3e-27 124.8 111 64.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.2e-26 123.6 85 70.6
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.2e-26 123.6 149 53.7
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.0e-26 122.9 88 75.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.0e-26 122.9 118 56.8
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 5.8e-26 121.3 118 55.1
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.8e-26 121.3 88 73.9
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.3e-25 120.2 107 60.7
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.7e-25 119.8 91 68.1
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.7e-25 119.8 132 53.0
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.9e-25 118.2 91 65.9
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 5.5e-24 114.8 85 71.8
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.3e-22 110.2 83 62.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.6e-20 103.2 87 55.2
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.8e-20 102.4 75 66.7
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.5e-18 96.7 110 51.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.5e-18 95.1 87 60.9
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 5.8e-18 94.7 135 43.7
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 6.5e-17 91.3 116 53.4
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.9e-16 89.7 68 66.2
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 3.5e-15 85.5 97 44.3
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 4.6e-15 85.1 121 38.8
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 1.3e-14 83.6 78 53.8
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.8e-14 83.2 132 40.9
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.5e-13 80.1 55 74.5
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.5e-13 79.3 81 49.4
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.1e-11 73.9 70 58.6
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 9.0e-11 70.9 78 48.7
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 6.1e-07 58.2 34 76.5
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 3.9e-06 55.5 51 51.0


User provided reference genes

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