Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold393G50704 Striga asiatica HOM05D010444 ORTHO05D010602 4.7e-171 604.4 290 100.0
AT4G34139 Arabidopsis thaliana HOM05D014563 ORTHO05D010602 3.1e-13 80.1 101 47.5
CiPaw.15G057400 Carya illinoinensis HOM05D014563 ORTHO05D010602 3.4e-12 76.6 101 48.5
SGA_v2.0_scaffold96G28940 Striga asiatica HOM05D015573 ORTHO05D017203 3.5e-09 66.6 128 37.5
MBI17_g19033_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 7.9e-09 65.5 101 41.6
SGA_v2.0_scaffold90G27610 Striga asiatica HOM05D010444 ORTHO05D010602 1.8e-08 64.3 70 54.3
Manes.12G036450 Manihot esculenta HOM05D014563 ORTHO05D010602 3.0e-08 63.5 57 56.1
Os04g0523650 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 6.7e-08 62.4 75 48.0
MBI15_g22229_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 8.7e-08 62.0 60 51.7
CiPaw.09G003700 Carya illinoinensis HOM05D014563 ORTHO05D010602 1.1e-07 61.6 103 40.8
MBI15_g22231_MAGBIO Magnolia biondii HOM05D014563 ORTHO05D010602 1.1e-07 61.6 60 51.7
Zm00001eb279500 Zea mays HOM05D031261 ORTHO05D010602 1.1e-07 61.6 89 43.8
Os04g0556550 Oryza sativa ssp. japonica HOM05D015573 ORTHO05D010602 2.5e-07 60.5 99 39.4
Manes.01G120601 Manihot esculenta HOM05D014563 ORTHO05D010602 4.3e-07 59.7 45 62.2
SGA_v2.0_scaffold181G39744 Striga asiatica HOM05D010444 ORTHO05D010602 9.6e-07 58.5 102 40.2
Os04g0523812 Oryza sativa ssp. japonica HOM05D031261 ORTHO05D010602 1.6e-06 57.8 43 60.5
Zm00001eb117540 Zea mays HOM05D010444 ORTHO05D010602 1.6e-06 57.8 103 37.9
HanXRQChr03g0091821 Helianthus annuus HOM05D010444 ORTHO05D010602 2.1e-06 57.4 75 44.0
Os01g0735450 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 2.8e-06 57.0 93 39.8
Zm00001eb353630 Zea mays HOM05D010444 ORTHO05D010602 2.8e-06 57.0 103 38.8
Migut.J01735 Erythranthe guttata HOM05D015573 ORTHO05D010602 3.7e-06 56.6 99 37.4
SGA_v2.0_scaffold89G27548 Striga asiatica HOM05D010444 ORTHO05D010602 3.7e-06 56.6 93 40.9
Os07g0503200 Oryza sativa ssp. japonica HOM05D010444 ORTHO05D010602 8.1e-06 55.5 45 57.8


User provided reference genes

Program Settings