Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold392G50668 Striga asiatica HOM05D003229 ORTHO05D003835 1.9e-254 882.1 466 100.0
SGA_v2.0_scaffold41G15781 Striga asiatica HOM05D003229 ORTHO05D003835 2.7e-51 207.2 601 31.4
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 5.7e-17 93.2 189 28.0
MSTRG.26568 Avicennia marina HOM05D003229 ORTHO05D003835 9.6e-17 92.4 318 32.1
HanXRQChr03g0089231 Helianthus annuus HOM05D003229 ORTHO05D003835 1.8e-15 88.2 125 36.0
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 2.0e-14 84.7 171 29.8
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 3.4e-14 84.0 128 33.6
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 7.6e-14 82.8 123 32.5
EL10Ac5g11782 Beta vulgaris HOM05D003229 ORTHO05D003835 3.8e-13 80.5 131 32.8
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 3.8e-13 80.5 118 30.5
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 5.0e-13 80.1 124 33.1
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 6.5e-13 79.7 135 31.1
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 8.5e-13 79.3 124 32.3
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 1.9e-12 78.2 124 31.5
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 3.2e-12 77.4 130 30.0
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 5.5e-12 76.6 126 34.9
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 7.2e-12 76.3 116 33.6
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 7.2e-12 76.3 119 33.6
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 7.2e-12 76.3 124 33.1
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 7.2e-12 76.3 124 33.1
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 9.3e-12 75.9 119 33.6
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 9.3e-12 75.9 77 46.8
THA.LOC104810972 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 2.1e-11 74.7 123 30.9
Ah.12g059520 Amaranthus hybridus HOM05D003229 ORTHO05D003835 2.7e-11 74.3 166 27.7
LjContig00564g0024504 Lotus japonicus HOM05D003229 ORTHO05D003835 2.7e-11 74.3 110 33.6
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 3.6e-11 73.9 125 30.4
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 4.6e-11 73.6 70 47.1
Nitab4.5_0000117g0180 Nicotiana tabacum HOM05D003229 ORTHO05D003835 4.6e-11 73.6 120 33.3
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 6.1e-11 73.2 145 29.0
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 6.1e-11 73.2 145 29.0
CARHR287360 Cardamine hirsuta HOM05D003229 ORTHO05D003835 7.9e-11 72.8 116 34.5
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 7.9e-11 72.8 116 31.9
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 7.9e-11 72.8 124 31.5
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 7.9e-11 72.8 92 38.0
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 1.0e-10 72.4 126 30.2
Nitab4.5_0002595g0030 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.0e-10 72.4 120 32.5
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 1.3e-10 72.0 73 42.5
Thhalv10020505m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.3e-10 72.0 115 32.2
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.8e-10 71.6 99 35.4
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.8e-10 71.6 74 41.9
AL5G21420 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 2.3e-10 71.2 121 33.1
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 2.3e-10 71.2 83 42.2
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 2.3e-10 71.2 92 38.0
C03p68590 Brassica napus HOM05D003229 ORTHO05D003835 3.0e-10 70.9 115 32.2
BolC3t19117H Brassica oleracea HOM05D003229 ORTHO05D003835 3.0e-10 70.9 115 32.2
BraA06t25329Z Brassica rapa HOM05D003229 ORTHO05D003835 3.0e-10 70.9 115 32.2
Thhalv10019590m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 3.0e-10 70.9 116 33.6
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 3.0e-10 70.9 94 38.3
CARHR267130 Cardamine hirsuta HOM05D003229 ORTHO05D003835 3.9e-10 70.5 144 29.9
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 5.1e-10 70.1 161 29.8
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 5.1e-10 70.1 122 31.1
AL5G21520 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 6.7e-10 69.7 116 33.6
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 6.7e-10 69.7 60 51.7
Sp5g17570 Schrenkiella parvula HOM05D003229 ORTHO05D003835 6.7e-10 69.7 116 33.6
Sed0019248 Sechium edule HOM05D003229 ORTHO05D003835 6.7e-10 69.7 67 44.8
Solyc01g056760.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 6.7e-10 69.7 101 35.6
A03p27320 Brassica napus HOM05D003229 ORTHO05D003835 8.7e-10 69.3 156 27.6
BraA03t11943Z Brassica rapa HOM05D003229 ORTHO05D003835 8.7e-10 69.3 156 27.6
AT3G43590 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 1.1e-09 68.9 116 33.6
BcaB01g02976 Brassica carinata HOM05D003229 ORTHO05D003835 1.5e-09 68.6 104 34.6
C03p32850 Brassica napus HOM05D003229 ORTHO05D003835 1.9e-09 68.2 106 35.8
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 2.5e-09 67.8 99 32.3
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 2.5e-09 67.8 116 32.8
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 2.5e-09 67.8 121 32.2
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 2.5e-09 67.8 127 28.3
BolC3t15620H Brassica oleracea HOM05D003229 ORTHO05D003835 3.3e-09 67.4 106 35.8
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 3.3e-09 67.4 67 44.8
Carub.0005s0918 Capsella rubella HOM05D003229 ORTHO05D003835 9.7e-09 65.9 115 32.2
Sc22g0002970 Simmondsia chinensis HOM05D003229 ORTHO05D003835 9.7e-09 65.9 114 31.6
vmacro04054 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 1.3e-08 65.5 89 37.1
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 1.6e-08 65.1 124 29.0
Potri.016G063800 Populus trichocarpa HOM05D003229 ORTHO05D003835 1.6e-08 65.1 132 29.5
SEGI_34455 Sequoiadendron giganteum HOM05D003229 ORTHO05D003835 1.6e-08 65.1 72 37.5
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 6.3e-08 63.2 127 29.1
CBR_g8477 Chara braunii HOM05D003229 ORTHO05D000407 8.2e-08 62.8 67 40.3
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 8.2e-08 62.8 153 26.8
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 1.1e-07 62.4 121 28.9
AUR62036294 Chenopodium quinoa HOM05D003229 ORTHO05D003835 1.4e-07 62.0 99 30.3
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 1.4e-07 62.0 122 27.9
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 1.8e-07 61.6 125 27.2
ClCG06G014150 Citrullus lanatus HOM05D003229 ORTHO05D003835 3.1e-07 60.8 60 41.7
MD03G1161300 Malus domestica HOM05D003229 ORTHO05D003835 5.3e-07 60.1 123 25.2
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 5.3e-07 60.1 126 29.4
DCAR_020672 Daucus carota HOM05D003229 ORTHO05D003835 6.9e-07 59.7 158 31.6
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 1.5e-06 58.5 116 27.6
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 2.0e-06 58.2 98 29.6
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 2.0e-06 58.2 98 29.6
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 2.0e-06 58.2 98 29.6
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 3.4e-06 57.4 99 31.3
Oeu047795.1 Olea europaea HOM05D003229 ORTHO05D003835 4.5e-06 57.0 47 46.8
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 4.5e-06 57.0 142 26.8
CDE05G3619 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 5.9e-06 56.6 73 35.6


User provided reference genes

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