Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold391G50621 Striga asiatica HOM05D003418 ORTHO05D004105 1.4e-111 406.4 213 100.0
SGA_v2.0_scaffold87G27173 Striga asiatica HOM05D003418 ORTHO05D004105 2.2e-45 186.4 131 72.5
MSTRG.8015 Avicennia marina HOM05D003418 ORTHO05D004105 8.8e-34 147.9 126 62.7
MSTRG.492 Avicennia marina HOM05D003418 ORTHO05D004105 2.6e-33 146.4 126 62.7
Migut.K00956 Erythranthe guttata HOM05D003418 ORTHO05D004105 2.8e-32 142.9 130 60.8
Oeu056671.1 Olea europaea HOM05D003418 ORTHO05D004105 2.8e-32 142.9 126 62.7
unitig_8.g3133 Utricularia gibba HOM05D003418 ORTHO05D004105 1.6e-30 137.1 135 56.3
unitig_22.g6403 Utricularia gibba HOM05D003418 ORTHO05D003127 5.9e-30 135.2 130 56.9
TWI18G0155 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 1.0e-29 134.4 138 52.9
Oeu049146.3 Olea europaea HOM05D003418 ORTHO05D004105 1.3e-29 134.0 119 62.2
DCAR_024672 Daucus carota HOM05D003418 ORTHO05D004105 3.8e-29 132.5 118 58.5
SalBow8G1362 Salvia bowleyana HOM05D003418 ORTHO05D004105 1.1e-28 131.0 108 64.8
CSS0043963 Camellia sinensis var. sinensis HOM05D003418 ORTHO05D004105 2.5e-28 129.8 127 55.1
Cc11_g17090 Coffea canephora HOM05D003418 ORTHO05D004105 2.5e-28 129.8 133 55.6
Oeu004464.1 Olea europaea HOM05D003418 ORTHO05D004105 2.5e-28 129.8 128 57.0
Aa31LG7G9910 Aethionema arabicum HOM05D003418 ORTHO05D004105 3.3e-28 129.4 130 53.1
Nitab4.5_0000340g0030 Nicotiana tabacum HOM05D003418 ORTHO05D004105 1.6e-27 127.1 129 55.8
Prupe.1G223700 Prunus persica HOM05D003418 ORTHO05D004105 2.1e-27 126.7 139 51.1
Lsat_1_v5_gn_3_30720 Lactuca sativa HOM05D000660 ORTHO05D000766 6.1e-27 125.2 143 51.0
Peaxi162Scf00518g00025 Petunia axillaris HOM05D003418 ORTHO05D004105 6.1e-27 125.2 139 59.0
Phvul.001G263300 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 8.0e-27 124.8 117 58.1
QL03p052131 Quercus lobata HOM05D003418 ORTHO05D004105 8.0e-27 124.8 132 51.5
SalBow2G0507 Salvia bowleyana HOM05D003418 ORTHO05D004105 8.0e-27 124.8 119 58.8
CiPaw.05G107800 Carya illinoinensis HOM05D003418 ORTHO05D004105 1.0e-26 124.4 132 54.5
Potri.001G058100 Populus trichocarpa HOM05D003418 ORTHO05D004105 2.3e-26 123.2 127 56.7
PGSC0003DMG401021901 Solanum tuberosum HOM05D003418 ORTHO05D004105 4.0e-26 122.5 117 57.3
Glyma.11G252200 Glycine max HOM05D003418 ORTHO05D004105 5.2e-26 122.1 126 54.0
Glyma.18G004900 Glycine max HOM05D003418 ORTHO05D004105 5.2e-26 122.1 125 57.6
Potri.003G170300 Populus trichocarpa HOM05D003418 ORTHO05D004105 5.2e-26 122.1 126 54.8
Nitab4.5_0000067g0190 Nicotiana tabacum HOM05D003418 ORTHO05D004105 6.8e-26 121.7 120 58.3
CANSAT01G2188 Cannabis sativa HOM05D003418 ORTHO05D004105 8.9e-26 121.3 123 56.1
AL1G40690 Arabidopsis lyrata HOM05D003418 ORTHO05D004105 2.0e-25 120.2 128 51.6
Haze_12439 Corylus avellana HOM05D003418 ORTHO05D004105 2.0e-25 120.2 133 52.6
Nitab4.5_0005872g0010 Nicotiana tabacum HOM05D003418 ORTHO05D004105 2.0e-25 120.2 132 51.5
Solyc05g015710.3 Solanum lycopersicum HOM05D003418 ORTHO05D004105 2.0e-25 120.2 135 51.1
PGSC0003DMG400013209 Solanum tuberosum HOM05D003418 ORTHO05D004105 2.0e-25 120.2 122 57.4
AT1G27290 Arabidopsis thaliana HOM05D003418 ORTHO05D004105 2.6e-25 119.8 134 50.7
CiPaw.06G104400 Carya illinoinensis HOM05D003418 ORTHO05D004105 2.6e-25 119.8 135 51.1
PGR119G0689 Punica granatum HOM05D003418 ORTHO05D004105 4.4e-25 119.0 131 51.9
Sopen05g011160 Solanum pennellii HOM05D003418 ORTHO05D004105 5.7e-25 118.6 110 56.4
Thecc.02G204700 Theobroma cacao HOM05D003418 ORTHO05D004105 5.7e-25 118.6 129 51.2
Ca_16446_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 7.5e-25 118.2 118 54.2
Manes.13G009900 Manihot esculenta HOM05D003418 ORTHO05D004105 7.5e-25 118.2 123 52.8
Gohir.A12G149400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 9.8e-25 117.9 129 53.5
CAN.G7.14 Capsicum annuum HOM05D003418 ORTHO05D004105 1.3e-24 117.5 122 54.9
Dinv17578 Davidia involucrata HOM05D003418 ORTHO05D004105 1.3e-24 117.5 127 52.0
Gohir.D12G153300 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.3e-24 117.5 129 52.7
HanXRQChr05g0128721 Helianthus annuus HOM05D003418 ORTHO05D004105 1.3e-24 117.5 129 54.3
THA.LOC104807496 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 1.3e-24 117.5 134 50.7
Sed0008687 Sechium edule HOM05D003418 ORTHO05D004105 1.7e-24 117.1 126 56.3
CARHR026860 Cardamine hirsuta HOM05D003418 ORTHO05D004105 2.2e-24 116.7 133 49.6
Duzib248G1492 Durio zibethinus HOM05D003418 ORTHO05D004105 2.2e-24 116.7 127 50.4
Gorai.008G165800 Gossypium raimondii HOM05D003418 ORTHO05D004105 2.2e-24 116.7 129 52.7
Dinv11681 Davidia involucrata HOM05D003418 ORTHO05D004105 2.9e-24 116.3 126 50.0
Hma1.2p1_0275F.1_g110610 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 2.9e-24 116.3 121 52.9
Manes.12G009300 Manihot esculenta HOM05D003418 ORTHO05D004105 2.9e-24 116.3 120 53.3
Ciclev10032970m.g Citrus clementina HOM05D003418 ORTHO05D004105 3.7e-24 115.9 133 51.9
Cpa.g.sc43.80 Carica papaya HOM05D003418 ORTHO05D004105 4.9e-24 115.5 133 50.4
Actinidia09637 Actinidia chinensis HOM05D003418 ORTHO05D004105 6.4e-24 115.2 132 51.5
CsaV3_4G002780 Cucumis sativus L. HOM05D003418 ORTHO05D004105 8.3e-24 114.8 121 54.5
FAN17G2596 Fragaria x ananassa HOM05D003418 ORTHO05D004105 8.3e-24 114.8 139 50.4
Hma1.2p1_0065F.1_g035230 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 8.3e-24 114.8 127 48.8
Sabra01G0041900 Salix brachista HOM05D003418 ORTHO05D004105 1.1e-23 114.4 146 48.6
ClCG07G015190 Citrullus lanatus HOM05D003418 ORTHO05D004105 1.4e-23 114.0 125 54.4
Lj6g0011251 Lotus japonicus HOM05D003418 ORTHO05D004105 1.4e-23 114.0 120 53.3
Actinidia08059 Actinidia chinensis HOM05D003418 ORTHO05D004105 1.8e-23 113.6 127 52.0
Medtr3g084990 Medicago truncatula HOM05D003418 ORTHO05D004105 1.8e-23 113.6 128 51.6
TWI36G1005 Tripterygium wilfordii HOM05D003418 ORTHO05D004105 1.8e-23 113.6 118 50.8
MELO3C017764.2 Cucumis melo HOM05D003418 ORTHO05D004105 2.4e-23 113.2 121 53.7
HanXRQChr06g0174711 Helianthus annuus HOM05D003418 ORTHO05D004105 2.4e-23 113.2 151 45.7
Gohir.A03G125000 Gossypium hirsutum HOM05D003418 ORTHO05D004105 3.2e-23 112.8 129 51.9
MD16G1121700 Malus domestica HOM05D003418 ORTHO05D004105 3.2e-23 112.8 134 47.8
THA.LOC104807144 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 3.2e-23 112.8 133 51.1
THA.LOC104809188 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 3.2e-23 112.8 133 51.1
THA.LOC104822793 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 3.2e-23 112.8 133 51.1
Duzib268G0386 Durio zibethinus HOM05D003418 ORTHO05D004105 4.1e-23 112.5 129 48.8
Sc11g0000380 Simmondsia chinensis HOM05D003418 ORTHO05D004105 4.1e-23 112.5 133 48.9
CSS0019501 Camellia sinensis var. sinensis HOM05D003418 ORTHO05D004105 5.4e-23 112.1 129 54.3
RcHm_v2.0_Chr4g0429941 Rosa chinensis HOM05D003418 ORTHO05D004105 5.4e-23 112.1 139 45.3
Duzib251G0418 Durio zibethinus HOM05D003418 ORTHO05D004105 7.0e-23 111.7 129 48.1
Gorai.005G165100 Gossypium raimondii HOM05D003418 ORTHO05D004105 9.2e-23 111.3 129 51.9
Carub.0001s2582 Capsella rubella HOM05D003418 ORTHO05D004105 1.2e-22 110.9 134 49.3
FAN12G4113 Fragaria x ananassa HOM05D003418 ORTHO05D004105 1.2e-22 110.9 155 43.9
MD13G1121400 Malus domestica HOM05D003418 ORTHO05D004105 1.2e-22 110.9 133 48.1
BcaB03g14004 Brassica carinata HOM05D003418 ORTHO05D004105 2.7e-22 109.8 131 48.1
MELO3C022314.2 Cucumis melo HOM05D003418 ORTHO05D004105 4.6e-22 109.0 125 48.8
CsaV3_6G008230 Cucumis sativus L. HOM05D003418 ORTHO05D004105 4.6e-22 109.0 123 50.4
TAR629G2062 Trochodendron aralioides HOM05D003418 ORTHO05D004105 4.6e-22 109.0 128 48.4
TPR.G17778 Trifolium pratense HOM05D003418 ORTHO05D004105 5.9e-22 108.6 127 49.6
EL10Ac6g13525 Beta vulgaris HOM05D003418 ORTHO05D004105 1.0e-21 107.8 128 52.3
unitig_26.g10403 Utricularia gibba HOM05D003418 ORTHO05D004105 1.0e-21 107.8 126 52.4
BolC3t19656H Brassica oleracea HOM05D003418 ORTHO05D004105 1.3e-21 107.5 139 45.3
Gohir.D02G147400 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.3e-21 107.5 129 51.2
FvH4_4g23540 Fragaria vesca HOM05D003418 ORTHO05D004105 1.7e-21 107.1 131 47.3
THA.LOC104825492 Tarenaya hassleriana HOM05D003418 ORTHO05D004105 1.7e-21 107.1 134 48.5
BraA08t34595Z Brassica rapa HOM05D003418 ORTHO05D004105 2.3e-21 106.7 139 45.3
Thhalv10009048m.g Eutrema salsugineum HOM05D003418 ORTHO05D004105 2.3e-21 106.7 126 47.6
FAN07G2322 Fragaria x ananassa HOM05D003418 ORTHO05D004105 2.3e-21 106.7 129 48.8
Ca_18018_v3 Cicer arietinum L. HOM05D003418 ORTHO05D004105 3.0e-21 106.3 113 50.4
Eucgr.H04620 Eucalyptus grandis HOM05D003418 ORTHO05D004105 3.9e-21 105.9 132 47.7
A07p11990 Brassica napus HOM05D003418 ORTHO05D004105 5.0e-21 105.5 130 46.9
A08p26430 Brassica napus HOM05D003418 ORTHO05D004105 5.0e-21 105.5 139 44.6
BraA07t28984Z Brassica rapa HOM05D003418 ORTHO05D004105 5.0e-21 105.5 132 46.2
Nn3g16424 Nelumbo nucifera HOM05D003418 ORTHO05D004105 5.0e-21 105.5 118 48.3
Sed0026789 Sechium edule HOM05D003418 ORTHO05D004105 5.0e-21 105.5 125 48.8
Atru.chr11.2346 Acer truncatum HOM05D003418 ORTHO05D004105 6.6e-21 105.1 125 48.8
Hund25475 Selenicereus undatus HOM05D003418 ORTHO05D004105 1.1e-20 104.4 130 48.5
BcaB03g12071 Brassica carinata HOM05D003418 ORTHO05D004105 1.5e-20 104.0 122 47.5
TPR.G17100 Trifolium pratense HOM05D003418 ORTHO05D004105 1.5e-20 104.0 110 50.0
C03p73650 Brassica napus HOM05D003418 ORTHO05D004105 1.9e-20 103.6 139 44.6
Sed0009671 Sechium edule HOM05D003418 ORTHO05D004105 2.5e-20 103.2 140 40.7
Lsat_1_v5_gn_4_781 Lactuca sativa HOM05D003418 ORTHO05D004105 3.3e-20 102.8 111 48.6
PGR102G1973 Punica granatum HOM05D003418 ORTHO05D004105 3.3e-20 102.8 131 45.8
Glyma.05G148600 Glycine max HOM05D003418 ORTHO05D004105 5.6e-20 102.1 112 51.8
Lj4g0014081 Lotus japonicus HOM05D003418 ORTHO05D004105 5.6e-20 102.1 115 47.0
Phvul.L003346 Phaseolus vulgaris HOM05D003418 ORTHO05D004105 5.6e-20 102.1 112 50.9
C07p17920 Brassica napus HOM05D003418 ORTHO05D004105 7.3e-20 101.7 130 46.2
Nitab4.5_0012747g0020 Nicotiana tabacum HOM05D003418 ORTHO05D004105 7.3e-20 101.7 91 62.6
C05p25990 Brassica napus HOM05D003418 ORTHO05D004105 9.5e-20 101.3 127 47.2
TAR374G1678 Trochodendron aralioides HOM05D003418 ORTHO05D004105 1.2e-19 100.9 122 48.4
arahy.Tifrunner.gnm1.ann1.R9UC9A Arachis hypogaea HOM05D003418 ORTHO05D004105 2.1e-19 100.1 120 48.3
arahy.Tifrunner.gnm1.ann1.V484X6 Arachis hypogaea HOM05D003418 ORTHO05D004105 2.1e-19 100.1 120 48.3
BcaC05g26544 Brassica carinata HOM05D003418 ORTHO05D004105 2.1e-19 100.1 124 47.6
Psat5g098080 Pisum sativum HOM05D003418 ORTHO05D004105 2.1e-19 100.1 121 47.1
BolC7t42298H Brassica oleracea HOM05D003418 ORTHO05D004105 3.6e-19 99.4 122 46.7
unitig_749.g13308 Utricularia gibba HOM05D003418 ORTHO05D004105 1.0e-18 97.8 127 48.0
Gohir.A01G154140 Gossypium hirsutum HOM05D003418 ORTHO05D004105 2.3e-18 96.7 129 41.9
Medtr8g097040 Medicago truncatula HOM05D003418 ORTHO05D004105 2.3e-18 96.7 124 46.0
Gohir.D05G311100 Gossypium hirsutum HOM05D003418 ORTHO05D004105 4.0e-18 95.9 124 44.4
Psat7g077520 Pisum sativum HOM05D003418 ORTHO05D004105 4.0e-18 95.9 121 45.5
Gorai.009G332100 Gossypium raimondii HOM05D003418 ORTHO05D004105 5.2e-18 95.5 126 42.9
Rhsim12G0093300 Rhododendron simsii HOM05D003418 ORTHO05D004105 6.8e-18 95.1 124 46.0
VMungo0251G0083 Vigna mungo HOM05D003418 ORTHO05D004105 6.8e-18 95.1 111 50.5
Gohir.A05G310300 Gossypium hirsutum HOM05D003418 ORTHO05D004105 8.9e-18 94.7 124 43.5
PSO017G5305 Papaver somniferum HOM05D003418 ORTHO05D004105 2.6e-17 93.2 126 42.9
MBI11_g22683_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 5.8e-17 92.0 134 42.5
Nn4g22281 Nelumbo nucifera HOM05D003418 ORTHO05D004105 5.8e-17 92.0 148 38.5
PSO478G5262 Papaver somniferum HOM05D003418 ORTHO05D004105 5.8e-17 92.0 126 42.1
Sopen04g016940 Solanum pennellii HOM05D003418 ORTHO05D004105 7.5e-17 91.7 74 67.6
Gorai.002G181900 Gossypium raimondii HOM05D003418 ORTHO05D004105 2.2e-16 90.1 129 39.5
CDE06G2031 Ceratophyllum demersum HOM05D003325 ORTHO05D003852 2.9e-16 89.7 147 40.1
Lalb_Chr23g0278191 Lupinus albus HOM05D003418 ORTHO05D004105 3.7e-16 89.4 106 48.1
Gohir.D01G146200 Gossypium hirsutum HOM05D003418 ORTHO05D004105 1.9e-15 87.0 129 38.8
CDE02G2290 Ceratophyllum demersum HOM05D003418 ORTHO05D004105 1.2e-14 84.3 133 39.1
Migut.E00007 Erythranthe guttata HOM05D003418 ORTHO05D004105 1.2e-14 84.3 120 45.8
Aqoxy3G01580 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 2.0e-14 83.6 124 41.9
Aqoxy5G03322 Aquilegia oxysepala HOM05D003418 ORTHO05D004105 4.6e-14 82.4 107 47.7
Ah.03g136010 Amaranthus hybridus HOM05D003418 ORTHO05D004105 1.0e-13 81.3 89 56.2
MBI07_g11273_MAGBIO Magnolia biondii HOM05D003418 ORTHO05D004105 1.3e-13 80.9 107 40.2
PSO017G5034 Papaver somniferum HOM05D003418 ORTHO05D004105 1.3e-13 80.9 141 39.7
PSO478G1430 Papaver somniferum HOM05D003418 ORTHO05D004105 3.0e-13 79.7 141 39.7
Lalb_Chr07g0187041 Lupinus albus HOM05D003418 ORTHO05D004105 6.6e-13 78.6 100 47.0
EL10Ac6g15425 Beta vulgaris HOM05D000704 ORTHO05D000526 8.6e-13 78.2 115 40.0
AUR62017773 Chenopodium quinoa HOM05D003418 ORTHO05D004105 1.1e-12 77.8 116 37.9
Rhsim08G0042100 Rhododendron simsii HOM05D003418 ORTHO05D004105 1.1e-12 77.8 132 40.9
Ah.02g130820 Amaranthus hybridus HOM05D000660 ORTHO05D000766 1.5e-12 77.4 122 48.4
Cfa007215 Carpinus fangiana HOM05D003418 ORTHO05D004105 1.5e-12 77.4 116 40.5
Medtr5g078400 Medicago truncatula HOM05D003418 ORTHO05D004105 3.3e-12 76.3 70 60.0
HPP92_025259 Vanilla planifolia HOM05D003418 ORTHO05D004105 4.3e-12 75.9 116 38.8
ATR0561G224 Amborella trichopoda HOM05D003418 ORTHO05D004105 1.2e-11 74.3 120 42.5
Lalb_Chr12g0206031 Lupinus albus HOM05D003418 ORTHO05D004105 1.2e-11 74.3 100 45.0
Haze_14888 Corylus avellana HOM05D003418 ORTHO05D004105 1.6e-11 73.9 116 39.7
CiPaw.03G057000 Carya illinoinensis HOM05D003418 ORTHO05D004105 3.6e-11 72.8 107 37.4
Glyma.19G093400 Glycine max HOM05D003418 ORTHO05D004105 6.8e-10 68.6 127 33.1
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 8.9e-10 68.2 77 49.4
SalBow7G0626 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.0e-09 67.0 109 40.4
Actinidia04435 Actinidia chinensis HOM05D003418 ORTHO05D004105 2.6e-09 66.6 113 34.5
Os09g0507400 Oryza sativa ssp. japonica HOM05D003418 ORTHO05D004105 2.6e-09 66.6 112 39.3
arahy.Tifrunner.gnm1.ann1.V4TZMI Arachis hypogaea HOM05D003418 ORTHO05D004105 3.4e-09 66.2 125 36.0
arahy.Tifrunner.gnm1.ann1.XFVS70 Arachis hypogaea HOM05D003418 ORTHO05D004105 3.4e-09 66.2 125 36.0
Ciclev10017602m.g Citrus clementina HOM05D003418 ORTHO05D004105 3.4e-09 66.2 135 28.9
Cc07_g00970 Coffea canephora HOM05D003418 ORTHO05D004105 5.8e-09 65.5 128 34.4
Zm00001eb102460 Zea mays HOM05D003418 ORTHO05D004105 9.8e-09 64.7 119 35.3
ClCG06G002160 Citrullus lanatus HOM05D003418 ORTHO05D004105 1.7e-08 63.9 73 54.8
Rhsim12G0024500 Rhododendron simsii HOM05D003418 ORTHO05D004105 1.7e-08 63.9 82 47.6
CANSAT64G1003 Cannabis sativa HOM05D003418 ORTHO05D004105 2.2e-08 63.5 135 33.3
Eucgr.I01636 Eucalyptus grandis HOM05D003418 ORTHO05D004105 3.7e-08 62.8 113 36.3
Actinidia30634 Actinidia chinensis HOM05D003418 ORTHO05D004105 4.9e-08 62.4 87 47.1
Zm00001eb364310 Zea mays HOM05D003418 ORTHO05D011080 4.9e-08 62.4 115 38.3
Hma1.2p1_1057F.1_g252730 Hydrangea macrophylla HOM05D003418 ORTHO05D004105 1.9e-07 60.5 60 48.3
Medtr7g028805 Medicago truncatula HOM05D003418 ORTHO05D004105 7.1e-07 58.5 126 29.4
Thecc.04G039200 Theobroma cacao HOM05D003418 ORTHO05D004105 9.2e-07 58.2 118 34.7
Cpa.g.sc171.2 Carica papaya HOM05D003418 ORTHO05D004105 2.7e-06 56.6 118 33.9
SalBow4G0150 Salvia bowleyana HOM05D003418 ORTHO05D004105 2.7e-06 56.6 114 32.5
SGA_v2.0_scaffold253G45188 Striga asiatica HOM05D003418 ORTHO05D004105 2.7e-06 56.6 111 34.2


User provided reference genes

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