Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold390G50593 Striga asiatica HOM05D000002 ORTHO05D403166 4.0e-113 411.4 201 100.0
Atru.chr1.2323 Acer truncatum HOM05D000006 ORTHO05D000001 4.0e-12 75.9 89 51.7
CANSAT01G2626 Cannabis sativa HOM05D000006 ORTHO05D000001 4.0e-12 75.9 92 50.0
ECA232G2478 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
ECA233G2364 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
ECA238G1149 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
ECA238G1515 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
ECA247G1119 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
ECA248G3034 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-11 72.0 92 48.9
CANSAT54G2675 Cannabis sativa HOM05D000427 ORTHO05D009859 1.7e-10 70.5 89 49.4
ECA233G1505 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-10 70.5 92 47.8
CANSAT01G1311 Cannabis sativa HOM05D000002 ORTHO05D000001 4.9e-10 68.9 84 50.0
ECA248G1039 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-10 68.6 92 47.8
ECA238G0426 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 67.4 91 48.4
CSS0014240 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 7.1e-09 65.1 71 56.3
Sopen07g008090 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-09 65.1 92 42.4
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.3 91 44.0
CSS0032052 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.3 91 44.0
ECA246G2006 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-08 63.9 91 46.2
TPR.G21848 Trifolium pratense HOM05D000002 ORTHO05D000001 1.6e-08 63.9 91 40.7
Hma1.2p1_0370F.1_g137900 Hydrangea macrophylla HOM05D000006 ORTHO05D000001 2.1e-08 63.5 91 41.8
CSS0005113 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.7e-08 63.2 91 44.0
CSS0030023 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.6e-08 62.4 92 43.5
ECA238G1642 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-08 62.4 90 45.6
Sopen01g018130 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen01g025590 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen01g025600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen03g009420 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-08 62.4 89 44.9
Sopen03g020190 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen09g023290 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen09g026420 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.4 92 42.4
Sopen10g020560 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.4 92 42.4
ECA246G0166 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-08 62.0 91 45.1
Rhsim10G0166500 Rhododendron simsii HOM05D000006 ORTHO05D000001 6.0e-08 62.0 92 44.6
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-08 61.6 91 42.9
CSS0042671 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 7.9e-08 61.6 91 42.9
CSS0049823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-08 61.6 91 42.9
PSO339G5984 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-08 61.6 89 42.7
Sopen01g011460 Solanum pennellii HOM05D000006 ORTHO05D000001 7.9e-08 61.6 92 41.3
TWI81G0766 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.9e-08 61.6 92 41.3
Sopen10g021210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 61.2 92 41.3
CSS0021825 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.3e-07 60.8 92 42.4
CSS0028480 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.3e-07 60.8 91 41.8
MD10G1162300 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-07 60.8 93 38.7
PSO384G1260 Papaver somniferum HOM05D000006 ORTHO05D000001 1.3e-07 60.8 92 39.1
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-07 60.5 91 41.8
Sopen01g027290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.5 92 40.2
CSS0019836 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 2.3e-07 60.1 91 41.8
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 60.1 91 41.8
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-07 60.1 92 42.4
MD06G1145700 Malus domestica HOM05D000006 ORTHO05D000001 2.3e-07 60.1 98 38.8
MD10G1162100 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 60.1 98 38.8
Sopen12g009690 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 60.1 92 41.3
Duzib041G0431 Durio zibethinus HOM05D000002 ORTHO05D000001 3.0e-07 59.7 84 41.7
ECA236G2735 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-07 59.7 91 45.1
MD08G1027200 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-07 59.7 91 36.3
Sopen01g018550 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 59.7 91 41.8
Sopen04g013470 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 59.7 92 41.3
TPR.G9899 Trifolium pratense HOM05D000002 ORTHO05D000001 3.0e-07 59.7 91 39.6
MD10G1071400 Malus domestica HOM05D000002 ORTHO05D000001 3.9e-07 59.3 91 39.6
Rhsim02G0190500 Rhododendron simsii HOM05D000006 ORTHO05D000001 3.9e-07 59.3 92 41.3
SHI07187 Sapria himalayana HOM05D000006 ORTHO05D000001 3.9e-07 59.3 78 42.3
Sopen05g015450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 59.3 92 41.3
Sopen10g007390 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-07 59.3 92 40.2
CSS0018233 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-07 58.9 83 43.4
PSO447G0204 Papaver somniferum HOM05D000006 ORTHO05D000001 5.1e-07 58.9 92 38.0
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-07 58.9 92 41.3
Cc00_g16480 Coffea canephora HOM05D000067 ORTHO05D000001 6.7e-07 58.5 46 65.2
ECA232G1933 Erigeron canadensis HOM05D000153 ORTHO05D000118 6.7e-07 58.5 61 55.7
ECA240G2946 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-07 58.5 46 67.4
Sopen12g027910 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 58.5 92 41.3
TPR.G40171 Trifolium pratense HOM05D000002 ORTHO05D000001 6.7e-07 58.5 92 39.1
Sopen01g027320 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 88 42.0
Sopen06g014890 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.2 92 39.1
Sopen07g014030 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-07 58.2 92 41.3
arahy.Tifrunner.gnm1.ann1.2CQC5M Arachis hypogaea HOM05D000002 ORTHO05D000001 1.1e-06 57.8 93 39.8
ECA248G2743 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.8 90 40.0
Nn6g33754 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-06 57.8 46 67.4
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 1.5e-06 57.4 102 35.3
MD09G1044400 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-06 57.4 91 36.3
SHI06261 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 93 39.8
SHI26279 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 93 39.8
SHI26422 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 93 39.8
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 93 39.8
SHI32554 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 93 39.8
MD01G1129400 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-06 57.0 90 36.7
MD16G1192200 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-06 57.0 91 36.3
MD17G1077500 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-06 57.0 91 36.3
Sopen03g009830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.0 83 42.2
FvH4_7g03911 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-06 56.6 93 40.9
SHI21638 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-06 56.6 108 36.1
Sopen01g021480 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 56.6 86 40.7
CSS0023554 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 3.3e-06 56.2 91 40.7
Duzib170G0209 Durio zibethinus HOM05D000002 ORTHO05D000001 3.3e-06 56.2 92 35.9
ECA240G2823 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 56.2 91 38.5
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-06 56.2 76 43.4
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 3.3e-06 56.2 92 38.0
CSS0031781 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 55.8 66 48.5
PSO782G5526 Papaver somniferum HOM05D000006 ORTHO05D000001 4.3e-06 55.8 92 35.9
SHI02969 Sapria himalayana HOM05D000006 ORTHO05D000001 4.3e-06 55.8 81 39.5
SHI12350 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.8 93 38.7
ECA232G4606 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.6e-06 55.5 91 38.5
MD00G1037700 Malus domestica HOM05D000002 ORTHO05D000001 5.6e-06 55.5 91 35.2
SHI27456 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-06 55.5 93 38.7
SHI54882 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-06 55.5 93 38.7
Sopen08g018030 Solanum pennellii HOM05D000006 ORTHO05D000001 5.6e-06 55.5 108 32.4
Thecc.02G208400 Theobroma cacao HOM05D000006 ORTHO05D000001 5.6e-06 55.5 88 35.2
TPR.G29482 Trifolium pratense HOM05D000002 ORTHO05D000001 5.6e-06 55.5 91 37.4
ECA240G4233 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 55.1 45 64.4
ECA248G3634 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-06 55.1 45 64.4
Medtr6g472230 Medicago truncatula HOM05D000005 ORTHO05D000012 7.4e-06 55.1 84 39.3
PSO063G3144 Papaver somniferum HOM05D000006 ORTHO05D000001 7.4e-06 55.1 93 36.6
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-06 55.1 93 37.6
CANSAT64G0470 Cannabis sativa HOM05D000006 ORTHO05D000001 9.6e-06 54.7 78 46.2
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 9.6e-06 54.7 92 37.0
MD07G1028600 Malus domestica HOM05D000002 ORTHO05D000001 9.6e-06 54.7 91 35.2
PSO478G4971 Papaver somniferum HOM05D000006 ORTHO05D000001 9.6e-06 54.7 92 35.9
SHI21792 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-06 54.7 94 37.2
SHI25171 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-06 54.7 93 38.7
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-06 54.7 92 39.1
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-06 54.7 92 39.1


User provided reference genes

Program Settings