Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold38G15118 Striga asiatica HOM05D036017 ORTHO05D405003 1.3e-76 289.7 143 100.0
SGA_v2.0_scaffold4126G54429 Striga asiatica HOM05D036017 ORTHO05D406159 1.3e-76 289.7 143 100.0
SGA_v2.0_scaffold5G02995 Striga asiatica HOM05D000040 ORTHO05D405325 6.0e-18 94.7 65 72.3
SGA_v2.0_scaffold5G02990 Striga asiatica HOM05D000040 ORTHO05D001305 8.6e-17 90.9 65 73.8
SGA_v2.0_scaffold5G02991 Striga asiatica HOM05D000040 ORTHO05D001305 8.6e-09 64.3 63 52.4
SGA_v2.0_scaffold918G53726 Striga asiatica HOM05D000040 ORTHO05D001305 1.6e-07 60.1 63 46.0
SGA_v2.0_scaffold305G47998 Striga asiatica HOM05D000040 ORTHO05D001305 2.8e-07 59.3 115 34.8
SGA_v2.0_scaffold27G11546 Striga asiatica HOM05D000040 ORTHO05D001305 4.7e-07 58.5 62 45.2
Eucgr.L01628 Eucalyptus grandis HOM05D000040 ORTHO05D001305 1.1e-06 57.4 62 48.4
QL02p018408 Quercus lobata HOM05D000040 ORTHO05D001305 1.4e-06 57.0 62 50.0
SGA_v2.0_scaffold27G11673 Striga asiatica HOM05D000040 ORTHO05D001305 1.8e-06 56.6 65 46.2
SGA_v2.0_scaffold758G53563 Striga asiatica HOM05D036017 ORTHO05D001305 1.8e-06 56.6 64 45.3
TWI34G0115 Tripterygium wilfordii HOM05D000040 ORTHO05D001305 1.8e-06 56.6 61 49.2
Eucgr.G01557 Eucalyptus grandis HOM05D000040 ORTHO05D001305 2.4e-06 56.2 62 46.8
Eucgr.G01565 Eucalyptus grandis HOM05D000040 ORTHO05D001305 2.4e-06 56.2 62 46.8
Eucgr.G01384 Eucalyptus grandis HOM05D000040 ORTHO05D001305 3.1e-06 55.8 62 46.8
QL02p018341 Quercus lobata HOM05D000040 ORTHO05D001305 3.1e-06 55.8 62 48.4
SGA_v2.0_scaffold672G53426 Striga asiatica HOM05D000040 ORTHO05D001305 4.0e-06 55.5 88 37.5
Eucgr.G01380 Eucalyptus grandis HOM05D000040 ORTHO05D001305 5.2e-06 55.1 62 46.8
Prupe.1G398200 Prunus persica HOM05D000040 ORTHO05D001305 5.2e-06 55.1 64 48.4
Eucgr.G01376 Eucalyptus grandis HOM05D000040 ORTHO05D001305 6.8e-06 54.7 62 46.8
MSTRG.25820 Avicennia marina HOM05D000040 ORTHO05D001305 8.9e-06 54.3 63 49.2
Carub.0006s0924 Capsella rubella HOM05D000040 ORTHO05D001305 8.9e-06 54.3 60 46.7
MBI14_g11786_MAGBIO Magnolia biondii HOM05D000040 ORTHO05D001305 8.9e-06 54.3 62 45.2
GSVIVG01036015001 Vitis vinifera HOM05D000040 ORTHO05D001305 8.9e-06 54.3 58 44.8


User provided reference genes

Program Settings