Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold38G15115 Striga asiatica HOM05D012482 ORTHO05D020520 2.2e-224 781.9 392 100.0
SGA_v2.0_scaffold66G22442 Striga asiatica HOM05D012482 ORTHO05D016197 1.4e-24 118.2 95 66.3
Os06g0232350 Oryza sativa ssp. japonica HOM05D012482 ORTHO05D016197 8.4e-22 109.0 99 59.6
SHI24530 Sapria himalayana HOM05D021115 ORTHO05D020520 4.2e-21 106.7 178 42.1
Zm00001eb372190 Zea mays HOM05D012482 ORTHO05D016197 4.3e-18 96.7 95 55.8
Zm00001eb194630 Zea mays HOM05D012482 ORTHO05D016197 2.8e-17 94.0 121 47.1
Os01g0643450 Oryza sativa ssp. japonica HOM05D021115 ORTHO05D020520 1.7e-14 84.7 65 61.5
Os12g0133850 Oryza sativa ssp. japonica HOM05D021115 ORTHO05D020520 3.5e-12 77.0 117 45.3
Os11g0137050 Oryza sativa ssp. japonica HOM05D021115 ORTHO05D020520 1.3e-11 75.1 114 45.6
Os05g0576950 Oryza sativa ssp. japonica HOM05D012482 ORTHO05D016197 8.7e-11 72.4 66 65.2
SHI19103 Sapria himalayana HOM05D021115 ORTHO05D020520 3.1e-08 63.9 76 55.3
HPP92_020631 Vanilla planifolia HOM05D012482 ORTHO05D016197 1.5e-07 61.6 98 40.8
SGA_v2.0_scaffold205G41763 Striga asiatica HOM05D012482 ORTHO05D400879 2.9e-06 57.4 148 33.8


User provided reference genes

Program Settings