Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 7.6e-289 996.5 519 100.0
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 5.3e-16 90.1 83 51.8
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-15 88.2 98 50.0
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 7.7e-15 86.3 98 49.0
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 7.7e-15 86.3 98 49.0
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-14 85.9 98 49.0
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 1.7e-14 85.1 98 48.0
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 1.7e-14 85.1 98 48.0
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 1.7e-14 85.1 98 48.0
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 3.2e-13 80.9 98 46.9
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 7.2e-13 79.7 98 45.9
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 1.6e-12 78.6 86 40.7
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-11 75.5 86 41.9
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.7e-10 70.1 121 33.9
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 8.2e-09 66.2 84 44.0
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-08 65.1 90 41.1
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 1.8e-08 65.1 46 63.0
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-08 64.7 45 53.3
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-08 64.7 45 53.3
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 3.1e-08 64.3 78 35.9
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-08 63.9 147 29.9
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 4.1e-08 63.9 62 40.3
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 5.3e-08 63.5 93 36.6
Nitab4.5_0009424g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.3e-08 63.5 120 27.5
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.0e-08 63.2 41 61.0
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 7.0e-08 63.2 90 37.8
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 9.1e-08 62.8 45 51.1
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 9.1e-08 62.8 90 36.7
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.2e-07 62.4 90 35.6
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-07 62.4 98 33.7
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.6e-07 62.0 90 35.6
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-07 62.0 56 51.8
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-07 61.6 78 35.9
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.0e-07 61.6 41 58.5
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.0e-07 61.6 72 47.2
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.0e-07 61.6 76 39.5
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 61.2 88 35.2
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 2.7e-07 61.2 84 34.5
Cfa010691 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.5e-07 60.8 90 36.7
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.5e-07 60.8 83 37.3
AUR62033344 Chenopodium quinoa HOM05D005931 ORTHO05D005553 3.5e-07 60.8 141 33.3
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 3.5e-07 60.8 75 34.7
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-07 60.8 65 41.5
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-07 60.8 58 50.0
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-07 60.8 58 50.0
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.5e-07 60.8 76 40.8
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 3.5e-07 60.8 53 54.7
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 4.5e-07 60.5 90 34.4
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 4.5e-07 60.5 90 35.6
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.5e-07 60.5 72 45.8
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 4.5e-07 60.5 45 51.1
QL06p049616 Quercus lobata HOM05D001383 ORTHO05D000309 4.5e-07 60.5 82 40.2
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 4.5e-07 60.5 94 37.2
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 4.5e-07 60.5 75 40.0
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 5.9e-07 60.1 94 34.0
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 5.9e-07 60.1 65 41.5
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.9e-07 60.1 72 43.1
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 5.9e-07 60.1 82 40.2
PGSC0003DMG402006646 Solanum tuberosum HOM05D009408 ORTHO05D000309 5.9e-07 60.1 46 52.2
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-07 59.7 70 41.4
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 7.7e-07 59.7 65 43.1
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.7e-07 59.7 76 40.8
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.7e-07 59.7 79 39.2
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.7e-07 59.7 79 39.2
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.7e-07 59.7 79 39.2
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 7.7e-07 59.7 75 38.7
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 7.7e-07 59.7 76 39.5
Ah.02g123460 Amaranthus hybridus HOM05D005931 ORTHO05D005553 1.0e-06 59.3 73 39.7
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.0e-06 59.3 58 48.3
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.0e-06 59.3 58 48.3
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.0e-06 59.3 70 41.4
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-06 59.3 47 53.2
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 1.3e-06 58.9 49 42.9
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 58.9 79 38.0
Eucgr.H02800 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.3e-06 58.9 45 51.1
Lsat_1_v5_gn_8_86741 Lactuca sativa HOM05D009585 ORTHO05D000309 1.3e-06 58.9 89 43.8
Nitab4.5_0000153g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.3e-06 58.9 125 30.4
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.3e-06 58.9 41 56.1
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-06 58.9 97 39.2
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-06 58.9 97 39.2
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-06 58.5 109 36.7
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.7e-06 58.5 41 56.1
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.7e-06 58.5 41 56.1
Nitab4.5_0000781g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-06 58.5 90 35.6
AUR62030225 Chenopodium quinoa HOM05D005931 ORTHO05D005553 2.2e-06 58.2 106 36.8
AUR62039321 Chenopodium quinoa HOM05D005931 ORTHO05D005553 2.2e-06 58.2 138 32.6
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.2e-06 58.2 127 29.1
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.2e-06 58.2 86 39.5
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-06 58.2 79 40.5
Nitab4.5_0008946g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-06 58.2 52 51.9
Peaxi162Scf00043g00065 Petunia axillaris HOM05D004040 ORTHO05D000309 2.2e-06 58.2 53 45.3
Peaxi162Scf00274g00613 Petunia axillaris HOM05D004040 ORTHO05D000309 2.2e-06 58.2 53 45.3
Peaxi162Scf00677g00029 Petunia axillaris HOM05D004040 ORTHO05D000309 2.2e-06 58.2 53 45.3
SGA_v2.0_scaffold14G07096 Striga asiatica HOM05D001383 ORTHO05D000309 2.2e-06 58.2 79 34.2
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.9e-06 57.8 90 35.6
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.9e-06 57.8 61 41.0
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.9e-06 57.8 50 48.0
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 57.8 89 33.7
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 57.8 65 41.5
Nitab4.5_0000270g0070 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.9e-06 57.8 41 56.1
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.9e-06 57.8 41 53.7
Nitab4.5_0029284g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.9e-06 57.8 82 35.4
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.9e-06 57.8 80 37.5
AUR62033745 Chenopodium quinoa HOM05D005931 ORTHO05D005553 3.8e-06 57.4 94 38.3
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 3.8e-06 57.4 44 52.3
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 3.8e-06 57.4 78 37.2
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 3.8e-06 57.4 65 40.0
Nitab4.5_0000073g0140 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.8e-06 57.4 41 56.1
Nitab4.5_0000299g0230 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.8e-06 57.4 41 53.7
Nitab4.5_0000923g0160 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.8e-06 57.4 55 47.3
Nitab4.5_0003178g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.8e-06 57.4 132 28.0
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.0e-06 57.0 95 34.7
AUR62027994 Chenopodium quinoa HOM05D005931 ORTHO05D005553 5.0e-06 57.0 148 31.8
Dinv12011 Davidia involucrata HOM05D015331 ORTHO05D000309 5.0e-06 57.0 87 40.2
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.0e-06 57.0 58 46.6
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.0e-06 57.0 65 38.5
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-06 57.0 54 44.4
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-06 57.0 98 38.8
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-06 57.0 74 37.8
Nitab4.5_0001117g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.0e-06 57.0 65 44.6
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.0e-06 57.0 74 37.8
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.0e-06 57.0 92 34.8
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 5.0e-06 57.0 92 34.8
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 5.0e-06 57.0 75 37.3
SGA_v2.0_scaffold10G05311 Striga asiatica HOM05D001383 ORTHO05D000309 5.0e-06 57.0 82 39.0
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 6.5e-06 56.6 80 36.2
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.5e-06 56.6 92 39.1
AUR62041061 Chenopodium quinoa HOM05D005931 ORTHO05D005553 6.5e-06 56.6 83 42.2
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 6.5e-06 56.6 43 55.8
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.5e-06 56.6 96 32.3
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.5e-06 56.6 59 45.8
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-06 56.6 90 34.4
Lsat_1_v5_gn_0_12581 Lactuca sativa HOM05D010091 ORTHO05D012356 6.5e-06 56.6 45 53.3
Lsat_1_v5_gn_2_85260 Lactuca sativa HOM05D012469 ORTHO05D000309 6.5e-06 56.6 139 32.4
Lsat_1_v5_gn_3_18240 Lactuca sativa HOM05D010091 ORTHO05D012356 6.5e-06 56.6 45 53.3
Lsat_1_v5_gn_4_63641 Lactuca sativa HOM05D010091 ORTHO05D012356 6.5e-06 56.6 45 53.3
Lsat_1_v5_gn_7_32160 Lactuca sativa HOM05D010091 ORTHO05D012356 6.5e-06 56.6 45 53.3
Lsat_1_v5_gn_7_32200 Lactuca sativa HOM05D010091 ORTHO05D012356 6.5e-06 56.6 45 53.3
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-06 56.6 76 38.2
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-06 56.6 76 38.2
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-06 56.6 89 30.3
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.5e-06 56.6 41 53.7
Nitab4.5_0003726g0110 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.5e-06 56.6 59 42.4
Nitab4.5_0016516g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.5e-06 56.6 40 55.0
Peaxi162Scf01138g00111 Petunia axillaris HOM05D004040 ORTHO05D000309 6.5e-06 56.6 95 33.7
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 8.5e-06 56.2 90 30.0
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 8.5e-06 56.2 83 39.8
MELO3C018497.2 Cucumis melo HOM05D010572 ORTHO05D012753 8.5e-06 56.2 88 37.5
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-06 56.2 96 32.3
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-06 56.2 58 46.6
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 8.5e-06 56.2 91 30.8
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 8.5e-06 56.2 86 34.9
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.5e-06 56.2 75 38.7
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 8.5e-06 56.2 91 33.0
Nitab4.5_0000682g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 8.5e-06 56.2 41 53.7
Nitab4.5_0002330g0150 Nicotiana tabacum HOM05D009794 ORTHO05D000309 8.5e-06 56.2 39 56.4
SalBow8G0778 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.5e-06 56.2 121 28.9
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.5e-06 56.2 90 34.4
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 8.5e-06 56.2 92 33.7


User provided reference genes

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