Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 2.6e-203 711.8 360 100.0
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 6.5e-146 521.2 346 77.5
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.1e-142 510.4 358 75.4
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 2.8e-141 505.8 350 75.1
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 5.5e-137 491.5 357 71.1
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.0e-135 487.3 357 73.4
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.4e-135 486.9 358 71.2
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 2.6e-134 482.6 355 70.7
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.3e-133 480.3 346 72.5
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.8e-133 479.2 350 71.1
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.8e-133 479.2 347 71.2
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.8e-132 476.5 357 70.6
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 2.4e-132 476.1 346 69.9
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.1e-132 475.3 358 70.4
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 2.6e-131 472.6 357 70.0
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 8.5e-130 467.6 358 69.6
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.9e-129 466.5 352 69.6
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.6e-128 463.4 358 67.9
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.1e-128 463.0 358 69.6
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.1e-128 463.0 357 67.8
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 2.1e-128 463.0 356 66.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 2.7e-128 462.6 344 70.6
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 3.6e-128 462.2 358 69.0
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 6.1e-128 461.5 357 67.5
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.8e-127 459.9 355 69.3
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 5.2e-127 458.4 394 63.7
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.7e-125 453.4 356 66.9
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.7e-125 452.2 344 67.7
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 4.8e-125 451.8 345 68.4
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 4.8e-125 451.8 354 66.4
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 6.3e-125 451.4 348 68.7
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 8.3e-125 451.1 351 67.2
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 1.1e-124 450.7 358 65.6
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.4e-124 450.3 344 67.7
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 4.1e-124 448.7 344 67.2
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 4.1e-124 448.7 344 67.2
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 9.1e-124 447.6 344 65.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.2e-123 447.2 344 67.4
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.2e-123 447.2 357 66.9
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.5e-123 445.3 344 66.6
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 4.5e-123 445.3 352 65.6
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 2.2e-122 443.0 355 65.9
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.5e-121 440.3 332 69.0
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.5e-121 440.3 345 66.7
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 3.2e-121 439.1 358 64.8
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 3.2e-121 439.1 345 66.7
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 5.5e-121 438.3 344 66.6
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 7.2e-121 438.0 354 65.0
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 9.4e-121 437.6 344 65.7
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.6e-120 436.8 375 62.1
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 2.1e-120 436.4 358 65.6
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 2.7e-120 436.0 344 65.4
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.7e-120 436.0 344 66.0
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 2.7e-120 436.0 356 64.9
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 4.7e-120 435.3 357 64.7
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 8.0e-120 434.5 357 65.0
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.0e-119 434.1 355 65.4
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.8e-119 433.3 358 63.4
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 4.0e-119 432.2 357 64.4
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 4.0e-119 432.2 357 63.9
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 6.8e-119 431.4 357 64.4
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 8.8e-119 431.0 355 64.5
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 8.8e-119 431.0 360 63.9
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 2.6e-118 429.5 354 64.4
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 3.4e-118 429.1 344 66.9
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 4.4e-118 428.7 343 65.0
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 7.5e-118 427.9 348 63.2
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 7.5e-118 427.9 358 62.6
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.3e-117 427.2 343 65.3
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.7e-117 426.8 362 62.4
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 8.3e-117 424.5 344 64.8
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.1e-116 424.1 385 60.5
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.1e-116 422.5 344 64.5
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 4.5e-115 418.7 345 63.2
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 3.8e-114 415.6 344 62.8
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.5e-113 413.7 311 69.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 2.8e-112 409.5 343 63.8
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 3.0e-111 406.0 287 72.8
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 6.8e-111 404.8 345 61.2
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 3.4e-110 402.5 355 61.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.6e-107 393.7 326 62.6
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.6e-104 383.6 358 58.7
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.3e-101 374.0 344 60.5
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.5e-97 360.5 356 55.9
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.5e-97 359.8 355 55.8
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 7.3e-97 358.2 351 56.7
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 2.3e-95 353.2 357 55.2
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 2.0e-94 350.1 265 69.8
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 4.9e-93 345.5 348 51.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.4e-84 317.4 344 49.7
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.5e-81 307.4 219 71.7
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.8e-80 303.1 228 70.6
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 8.1e-80 301.6 343 45.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 2.0e-78 297.0 257 61.1
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.6e-78 296.6 347 46.1
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 6.0e-75 285.4 201 74.1
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.0e-74 284.6 347 43.8
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 5.6e-73 278.9 195 73.8
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.1e-63 248.1 328 43.6
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 4.0e-63 246.1 184 69.6
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.2e-62 244.6 347 39.5
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 9.3e-60 235.0 153 77.8
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 6.7e-58 228.8 392 40.6
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 5.6e-57 225.7 380 37.4
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.6e-51 207.6 197 56.9
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 5.3e-47 192.6 125 79.2
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.9e-41 174.1 192 45.3
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.5e-36 156.0 342 33.9
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 9.4e-36 155.2 341 33.7
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.8e-34 151.0 247 36.8
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.1e-33 148.3 124 61.3
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 3.2e-20 103.6 107 54.2
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.0e-13 82.0 98 46.9
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 9.4e-12 75.5 69 59.4
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 9.4e-12 75.5 69 59.4
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.3e-10 70.9 59 57.6


User provided reference genes

Program Settings