Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 3.2e-234 814.7 405 100.0
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.5e-135 486.9 409 62.6
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 4.8e-129 465.3 374 63.9
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 2.4e-125 453.0 403 59.8
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 6.9e-112 408.3 394 54.3
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 2.6e-111 406.4 382 57.1
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 6.5e-110 401.7 388 55.2
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 1.9e-109 400.2 382 55.2
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 7.1e-109 398.3 404 52.0
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 7.1e-109 398.3 395 53.9
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 2.1e-108 396.7 404 51.5
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 1.9e-106 390.2 377 54.6
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 2.5e-106 389.8 368 54.6
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 7.4e-106 388.3 393 52.7
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 1.3e-105 387.5 373 54.4
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 1.8e-104 383.6 378 53.2
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 3.1e-104 382.9 394 52.5
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 5.3e-104 382.1 408 52.9
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 1.5e-103 380.6 388 52.8
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 4.5e-103 379.0 391 53.7
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 5.0e-102 375.6 464 45.7
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 5.0e-102 375.6 401 50.9
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 1.1e-101 374.4 427 48.9
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 1.4e-101 374.0 373 52.8
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 1.4e-101 374.0 421 48.5
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 9.4e-101 371.3 309 62.5
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 4.6e-100 369.0 402 49.3
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 1.8e-99 367.1 367 52.9
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 2.3e-99 366.7 383 52.5
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 6.7e-99 365.2 412 48.8
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 1.1e-98 364.4 384 51.0
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 1.5e-98 364.0 401 48.9
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 1.9e-98 363.6 374 51.1
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 2.8e-97 359.8 381 50.7
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 6.3e-97 358.6 432 47.2
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 6.3e-97 358.6 432 47.2
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 3.1e-96 356.3 321 56.4
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 3.1e-96 356.3 459 46.6
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 4.1e-96 355.9 367 51.8
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 3.4e-95 352.8 344 55.5
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 7.7e-95 351.7 402 48.5
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 2.9e-94 349.7 397 49.4
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 8.5e-94 348.2 394 49.5
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 1.1e-93 347.8 367 50.1
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 1.4e-93 347.4 370 52.2
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 4.7e-92 342.4 393 48.9
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 4.7e-92 342.4 350 52.0
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 4.7e-92 342.4 366 50.3
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 1.4e-91 340.9 376 50.3
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 1.8e-91 340.5 385 50.1
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 1.8e-91 340.5 385 50.1
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 2.3e-91 340.1 375 49.1
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 3.9e-91 339.3 387 49.9
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 3.9e-91 339.3 446 44.6
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 5.1e-91 339.0 369 49.9
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 6.7e-91 338.6 373 49.9
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 8.8e-91 338.2 372 51.1
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 8.8e-91 338.2 374 50.5
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 1.5e-90 337.4 379 50.7
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 5.7e-90 335.5 369 50.7
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 1.7e-89 334.0 372 50.0
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 2.2e-89 333.6 372 50.3
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 1.1e-88 331.3 377 50.7
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.2e-87 327.8 404 45.0
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 1.2e-87 327.8 344 51.5
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 1.5e-87 327.4 372 48.7
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 7.7e-87 325.1 372 48.9
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 1.0e-86 324.7 372 48.9
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 1.0e-86 324.7 374 46.3
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 2.9e-86 323.2 372 49.5
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 1.1e-85 321.2 357 49.3
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 1.4e-85 320.9 372 49.2
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.4e-85 320.9 330 52.7
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.4e-85 320.9 330 52.7
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 2.5e-85 320.1 347 49.0
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.2e-84 317.8 357 50.4
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 1.6e-84 317.4 328 50.9
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 1.6e-84 317.4 331 51.4
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 3.6e-84 316.2 239 67.8
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 8.0e-84 315.1 372 48.7
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 3.3e-82 309.7 367 48.2
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 2.2e-81 307.0 380 44.5
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 8.2e-81 305.1 340 47.4
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 4.1e-80 302.8 384 46.6
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 4.5e-79 299.3 329 50.5
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 2.1e-76 290.4 268 56.3
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 6.1e-76 288.9 272 56.2
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 8.0e-76 288.5 330 47.9
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 6.7e-75 285.4 229 65.1
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 3.3e-74 283.1 230 60.9
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 2.8e-73 280.0 411 40.6
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 2.4e-72 276.9 372 42.7
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 2.4e-72 276.9 364 44.5
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 4.1e-72 276.2 404 41.1
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 7.0e-72 275.4 239 59.4
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 2.0e-71 273.9 221 60.2
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 4.5e-71 272.7 374 42.5
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 1.1e-69 268.1 230 57.8
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 1.6e-68 264.2 245 55.9
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 2.7e-68 263.5 370 41.6
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 1.0e-67 261.5 226 61.5
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 8.8e-67 258.5 220 57.7
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 1.2e-66 258.1 216 60.6
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.7e-65 254.2 366 41.5
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 5.2e-59 232.6 362 39.0
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.2e-58 231.5 355 40.0
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 1.5e-58 231.1 384 40.1
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 5.7e-58 229.2 142 76.8
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 1.4e-56 224.6 180 63.3
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.2e-55 221.5 372 39.8
HPP92_017513 Vanilla planifolia HOM05D006152 ORTHO05D008137 1.4e-51 208.0 246 47.2
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 6.8e-51 205.7 223 49.8
Cre17.g729650 Chlamydomonas reinhardtii HOM05D006152 ORTHO05D008137 1.5e-50 204.5 307 39.7
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 5.4e-48 196.1 314 38.9
Dinv43207 Davidia involucrata HOM05D006152 ORTHO05D008137 1.3e-46 191.4 213 50.7
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 1.4e-43 181.4 179 54.7
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 2.1e-39 167.5 222 44.1
Zm00001eb374780 Zea mays HOM05D006152 ORTHO05D008137 8.1e-36 155.6 180 46.1
AUR62038836 Chenopodium quinoa HOM05D001472 ORTHO05D008137 2.3e-35 154.1 232 38.4
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 5.8e-34 149.4 178 47.2
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 2.2e-33 147.5 143 51.7
PGR142G1207 Punica granatum HOM05D006152 ORTHO05D008137 2.8e-28 130.6 91 65.9
FvH4_1g01360 Fragaria vesca HOM05D006152 ORTHO05D045810 8.1e-28 129.0 98 61.2
GSVIVG01003719001 Vitis vinifera HOM05D006152 ORTHO05D008137 5.2e-27 126.3 80 71.2
FvH4_1g01380 Fragaria vesca HOM05D006152 ORTHO05D008137 9.9e-26 122.1 152 44.1
TAR383G0486 Trochodendron aralioides HOM05D006152 ORTHO05D008137 4.7e-20 103.2 100 55.0
Sc04g0006660 Simmondsia chinensis HOM05D006152 ORTHO05D008137 7.8e-15 85.9 95 49.5
FvH4_1g01381 Fragaria vesca HOM05D006152 ORTHO05D029506 2.8e-12 77.4 62 64.5
FAN26G1951 Fragaria x ananassa HOM05D006152 ORTHO05D029506 1.1e-11 75.5 62 62.9
SMO356G0211 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 6.9e-11 72.8 64 50.0
AUR62029567 Chenopodium quinoa HOM05D001472 ORTHO05D015242 2.0e-10 71.2 77 44.2
Sc08g0005240 Simmondsia chinensis HOM05D006152 ORTHO05D008137 2.0e-10 71.2 99 44.4
MD00G1188300 Malus domestica HOM05D006152 ORTHO05D029506 2.6e-10 70.9 64 56.2
FAN19G2321 Fragaria x ananassa HOM05D006152 ORTHO05D029506 3.4e-10 70.5 38 81.6
Potri.018G111500 Populus trichocarpa HOM05D006152 ORTHO05D008137 3.4e-10 70.5 87 43.7
FAN19G0239 Fragaria x ananassa HOM05D006152 ORTHO05D045810 1.2e-07 62.0 54 55.6


User provided reference genes

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