Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 9.4e-179 630.2 340 100.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.6e-45 187.6 165 72.7
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.1e-45 187.2 161 72.0
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 8.3e-42 175.3 153 66.0
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 5.4e-41 172.6 161 60.9
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 1.2e-40 171.4 227 47.1
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.2e-40 171.4 161 60.2
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.0e-40 170.6 154 62.3
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.0e-40 170.6 154 62.3
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.0e-39 168.3 145 64.8
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.7e-39 167.5 156 60.9
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 2.2e-39 167.2 163 63.2
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.9e-39 166.8 161 60.2
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 3.8e-39 166.4 157 60.5
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 8.5e-39 165.2 157 62.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.5e-38 164.5 161 58.4
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.9e-38 164.1 164 66.5
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.5e-38 163.7 160 59.4
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.2e-38 163.3 167 58.7
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.2e-38 163.3 167 58.7
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 4.2e-38 162.9 163 60.7
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 4.2e-38 162.9 154 62.3
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 4.2e-38 162.9 161 64.6
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 5.5e-38 162.5 159 60.4
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 5.5e-38 162.5 163 60.1
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 7.2e-38 162.2 171 56.1
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 7.2e-38 162.2 167 56.9
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 9.4e-38 161.8 157 59.2
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.1e-37 160.6 161 62.7
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.7e-37 160.2 152 61.8
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 2.7e-37 160.2 161 62.1
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 3.6e-37 159.8 146 62.3
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 4.7e-37 159.5 155 63.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 4.7e-37 159.5 160 57.5
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.0e-36 158.3 156 60.3
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.4e-36 157.9 158 59.5
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.4e-36 157.9 153 57.5
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 1.4e-36 157.9 165 58.8
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.8e-36 157.5 161 56.5
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-36 157.5 151 60.3
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.8e-36 157.5 151 60.3
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.8e-36 157.5 157 58.0
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.3e-36 157.1 160 54.4
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 3.0e-36 156.8 142 62.0
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 4.0e-36 156.4 157 57.3
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 4.0e-36 156.4 160 57.5
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 4.0e-36 156.4 161 59.6
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 5.2e-36 156.0 160 58.8
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.0e-35 154.1 158 57.6
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 2.0e-35 154.1 160 56.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 2.6e-35 153.7 165 55.8
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 3.4e-35 153.3 157 58.6
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.4e-35 153.3 164 54.9
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 4.4e-35 152.9 165 53.9
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.4e-35 152.9 165 55.8
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 7.5e-35 152.1 160 53.1
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 7.5e-35 152.1 165 54.5
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 7.5e-35 152.1 160 60.6
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 9.8e-35 151.8 165 52.7
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.8e-34 150.2 161 62.7
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.1e-33 148.3 160 55.0
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 7.0e-33 145.6 155 54.2
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 9.1e-33 145.2 164 56.1
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.6e-32 144.4 164 57.3
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.0e-32 144.1 160 53.1
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 3.5e-32 143.3 161 53.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 5.9e-32 142.5 161 54.7
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 1.3e-31 141.4 93 74.2
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.3e-31 141.4 99 71.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.7e-31 141.0 149 66.4
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 1.7e-31 141.0 160 52.5
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 3.8e-31 139.8 170 50.6
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.1e-30 138.3 149 55.7
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.1e-30 138.3 170 51.2
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.9e-30 137.5 155 53.5
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.9e-30 137.5 165 57.6
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 3.3e-30 136.7 165 58.8
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 1.2e-29 134.8 160 51.2
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 1.6e-29 134.4 159 51.6
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.8e-29 133.7 164 45.7
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 4.7e-29 132.9 164 50.6
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 8.0e-29 132.1 98 69.4
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 8.0e-29 132.1 166 56.0
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.0e-28 131.7 159 54.1
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.8e-28 131.0 153 53.6
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 2.3e-28 130.6 165 49.7
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 4.0e-28 129.8 163 55.2
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 6.8e-28 129.0 177 45.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 3.4e-27 126.7 164 49.4
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 9.8e-27 125.2 153 56.2
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 2.2e-26 124.0 159 49.7
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 6.4e-26 122.5 164 50.0
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 6.4e-26 122.5 164 49.4
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 6.4e-26 122.5 164 49.4
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 6.4e-26 122.5 164 50.0
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.4e-25 121.3 159 47.8
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 5.4e-25 119.4 176 44.3
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.6e-24 117.9 159 47.8
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.6e-24 117.9 155 47.7
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 3.5e-24 116.7 85 71.8
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.7e-23 114.4 79 74.7
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 3.9e-23 113.2 149 55.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-22 111.7 153 45.8
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.5e-22 111.3 153 45.8
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.5e-22 110.5 153 45.8
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.5e-22 108.6 160 44.4
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.5e-22 108.6 153 45.1
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.6e-21 107.8 164 45.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 2.8e-21 107.1 151 46.4
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 6.2e-21 105.9 147 49.0
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 6.8e-20 102.4 136 44.9
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 5.8e-19 99.4 87 65.5
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 2.9e-18 97.1 106 52.8
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.4e-17 94.7 94 53.2
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 3.5e-16 90.1 157 41.4
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-15 88.6 117 47.0
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 2.3e-15 87.4 150 42.7
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.3e-15 87.4 87 54.0
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 5.0e-15 86.3 125 52.0
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.6e-13 80.1 125 44.0
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 4.0e-12 76.6 110 46.4
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.9e-10 70.5 54 68.5
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.6e-08 64.7 150 33.3
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 9.5e-06 55.5 96 37.5


User provided reference genes

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