Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold386G50500 Striga asiatica HOM05D023019 ORTHO05D013546 8.0e-307 1056.2 513 100.0
SGA_v2.0_scaffold386G50502 Striga asiatica HOM05D023019 ORTHO05D013546 1.1e-274 949.5 454 100.0
SGA_v2.0_scaffold56G20030 Striga asiatica HOM05D023019 ORTHO05D013546 2.4e-202 709.1 456 79.4
SGA_v2.0_scaffold189G40374 Striga asiatica HOM05D023019 ORTHO05D013546 2.2e-147 526.6 346 76.0
SGA_v2.0_scaffold94G28510 Striga asiatica HOM05D012549 ORTHO05D013546 7.5e-47 192.6 445 32.4
SGA_v2.0_scaffold80G25794 Striga asiatica HOM05D012549 ORTHO05D013546 9.8e-47 192.2 446 31.2
SGA_v2.0_scaffold199G41212 Striga asiatica HOM05D012549 ORTHO05D013546 7.1e-45 186.0 452 29.9
SGA_v2.0_scaffold80G25772 Striga asiatica HOM05D012549 ORTHO05D013546 1.9e-42 177.9 447 30.9
SGA_v2.0_scaffold98G29332 Striga asiatica HOM05D012549 ORTHO05D013546 4.3e-42 176.8 443 32.5
SGA_v2.0_scaffold80G25855 Striga asiatica HOM05D012549 ORTHO05D013546 3.1e-40 170.6 453 29.8
SGA_v2.0_scaffold98G29336 Striga asiatica HOM05D012549 ORTHO05D013546 4.0e-40 170.2 452 31.6
SGA_v2.0_scaffold80G25779 Striga asiatica HOM05D012549 ORTHO05D013546 2.3e-27 127.9 323 31.6
CANSAT21G1526 Cannabis sativa HOM05D012549 ORTHO05D013546 1.8e-19 101.7 484 26.2
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 1.1e-16 92.4 482 24.3
SGA_v2.0_scaffold98G29327 Striga asiatica HOM05D012549 ORTHO05D013546 1.1e-16 92.4 365 25.8
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 4.0e-16 90.5 441 24.9
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 1.7e-14 85.1 275 31.6
CANSAT54G0181 Cannabis sativa HOM05D023019 ORTHO05D013546 3.8e-14 84.0 392 27.3
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 3.8e-14 84.0 262 30.2
CANSAT78G0001 Cannabis sativa HOM05D012549 ORTHO05D013546 4.9e-14 83.6 368 25.8
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 1.9e-13 81.6 290 27.9
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-13 80.9 327 25.7
Potri.011G000700 Populus trichocarpa HOM05D001729 ORTHO05D001155 3.2e-13 80.9 422 24.4
AUR62035623 Chenopodium quinoa HOM05D001729 ORTHO05D001155 4.2e-13 80.5 286 26.9
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 5.5e-13 80.1 448 24.6
Ah.07g204710 Amaranthus hybridus HOM05D001729 ORTHO05D001155 7.1e-13 79.7 287 29.6
CANSAT78G1812 Cannabis sativa HOM05D012549 ORTHO05D013546 9.3e-13 79.3 412 25.5
AUR62006003 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.2e-12 79.0 285 26.7
Potri.009G132400 Populus trichocarpa HOM05D001729 ORTHO05D001155 1.2e-12 79.0 457 24.5
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 1.6e-12 78.6 452 24.3
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 1.6e-12 78.6 460 24.1
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 2.1e-12 78.2 370 26.2
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 2.7e-12 77.8 506 23.5
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 4.6e-12 77.0 362 24.9
CANSAT21G0540 Cannabis sativa HOM05D012549 ORTHO05D001155 4.6e-12 77.0 459 24.8
QL07p036110 Quercus lobata HOM05D001729 ORTHO05D001155 1.0e-11 75.9 262 28.2
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.3e-11 75.5 280 28.2
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 2.3e-11 74.7 436 24.3
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 2.3e-11 74.7 405 25.2
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 3.0e-11 74.3 436 23.9
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 3.0e-11 74.3 491 23.0
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 6.7e-11 73.2 436 24.3
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.7e-11 72.8 483 23.4
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 1.5e-10 72.0 322 26.7
Sabra09G0102700 Salix brachista HOM05D001729 ORTHO05D001155 2.5e-10 71.2 283 25.8
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 4.3e-10 70.5 466 22.3
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.6e-10 70.1 466 22.3
PGSC0003DMG400005639 Solanum tuberosum HOM05D001729 ORTHO05D001155 5.6e-10 70.1 443 24.6
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 9.6e-10 69.3 453 24.1
PGSC0003DMG400005638 Solanum tuberosum HOM05D001729 ORTHO05D001155 9.6e-10 69.3 437 21.3
FAN09G3613 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-09 68.9 287 26.5
PGSC0003DMG400021824 Solanum tuberosum HOM05D000664 ORTHO05D000491 1.3e-09 68.9 288 25.3
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 1.6e-09 68.6 453 23.0
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 2.8e-09 67.8 454 23.1
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 2.8e-09 67.8 276 23.9
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 3.7e-09 67.4 279 27.6
Aqoxy2G01152 Aquilegia oxysepala HOM05D000664 ORTHO05D000491 4.8e-09 67.0 449 23.2
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 8.2e-09 66.2 479 22.3
AUR62027174 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.1e-08 65.9 263 24.3
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 1.8e-08 65.1 269 26.4
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-08 64.3 462 22.5
QL06p001050 Quercus lobata HOM05D001729 ORTHO05D001155 3.1e-08 64.3 220 30.0
FAN24G2236 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.0e-08 63.9 259 25.1
Phvul.009G222800 Phaseolus vulgaris HOM05D001729 ORTHO05D001155 4.0e-08 63.9 455 22.0
FAN02G3460 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.9e-08 63.2 267 26.2
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-08 63.2 480 22.7
PSO063G7655 Papaver somniferum HOM05D008326 ORTHO05D001155 6.9e-08 63.2 344 23.3
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 9.0e-08 62.8 216 28.7
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 62.4 280 24.6
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-07 62.4 246 26.0
FvH4_6g46260 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-07 62.0 469 22.8
FAN24G2446 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-07 62.0 289 26.3
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-07 62.0 236 24.2
COL.COLO4_37365 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.0e-07 61.6 232 30.2
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 2.0e-07 61.6 181 27.6
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 2.6e-07 61.2 433 23.1
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 2.6e-07 61.2 456 22.8
COL.COLO4_31801 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.4e-07 60.8 264 25.8
COL.COLO4_37351 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.4e-07 60.8 215 29.3
COL.COLO4_38551 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.4e-07 60.8 245 25.7
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 3.4e-07 60.8 270 25.9
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 3.4e-07 60.8 492 23.2
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 4.5e-07 60.5 474 23.0
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 4.5e-07 60.5 457 25.4
Lsat_1_v5_gn_9_51281 Lactuca sativa HOM05D000664 ORTHO05D000491 4.5e-07 60.5 243 26.7
RcHm_v2.0_Chr2g0153011 Rosa chinensis HOM05D000007 ORTHO05D000017 4.5e-07 60.5 267 25.1
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 5.8e-07 60.1 244 24.2
QL05p073999 Quercus lobata HOM05D003814 ORTHO05D004399 5.8e-07 60.1 156 28.8
Hund16586 Selenicereus undatus HOM05D002420 ORTHO05D002422 5.8e-07 60.1 176 29.5
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.6e-07 59.7 270 24.8
Gohir.D11G237600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.6e-07 59.7 262 26.3
Gorai.007G251000 Gossypium raimondii HOM05D000664 ORTHO05D000491 7.6e-07 59.7 262 26.3
QL04p045563 Quercus lobata HOM05D000007 ORTHO05D000039 7.6e-07 59.7 273 24.9
Aa31LG11G8430 Aethionema arabicum HOM05D007162 ORTHO05D007631 1.0e-06 59.3 277 26.0
Gohir.A11G224210 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.0e-06 59.3 274 24.8
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 1.0e-06 59.3 468 21.4
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.0e-06 59.3 250 28.0
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 1.3e-06 58.9 278 24.1
FAN09G0245 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-06 58.9 289 26.0
QL06p045688 Quercus lobata HOM05D002420 ORTHO05D002422 1.3e-06 58.9 280 24.6
ATR0693G387 Amborella trichopoda HOM05D007162 ORTHO05D007631 1.7e-06 58.5 149 34.2
EL10Ac3g05554 Beta vulgaris HOM05D007162 ORTHO05D007631 1.7e-06 58.5 277 25.3
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 1.7e-06 58.5 290 26.6
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 2.2e-06 58.2 439 24.1
CAN.G929.25 Capsicum annuum HOM05D002420 ORTHO05D002422 2.9e-06 57.8 262 25.2
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 2.9e-06 57.8 249 26.5
Solyc05g051583.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 2.9e-06 57.8 275 24.4
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-06 57.4 283 24.7
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 4.9e-06 57.0 278 23.7
ClCG01G004670 Citrullus lanatus HOM05D000664 ORTHO05D000491 4.9e-06 57.0 213 27.7
Duzib147G0480 Durio zibethinus HOM05D002420 ORTHO05D002422 4.9e-06 57.0 194 26.8
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.9e-06 57.0 256 26.6
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 6.5e-06 56.6 261 24.5
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 6.5e-06 56.6 216 27.3
Gohir.D10G181300 Gossypium hirsutum HOM05D007162 ORTHO05D007631 6.5e-06 56.6 279 25.4
Gorai.011G202800 Gossypium raimondii HOM05D007162 ORTHO05D007631 6.5e-06 56.6 279 25.4
QL09p022589 Quercus lobata HOM05D000007 ORTHO05D000039 6.5e-06 56.6 209 29.2
TWI34G0727 Tripterygium wilfordii HOM05D001729 ORTHO05D001155 6.5e-06 56.6 256 25.0
COL.COLO4_32997 Corchorus olitorius HOM05D000664 ORTHO05D000491 8.4e-06 56.2 246 25.2
FAN14G2361 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.4e-06 56.2 274 24.8
Lsat_1_v5_gn_9_51501 Lactuca sativa HOM05D000664 ORTHO05D000491 8.4e-06 56.2 240 26.7
TAR362G1081 Trochodendron aralioides HOM05D007162 ORTHO05D007631 8.4e-06 56.2 262 26.3


User provided reference genes

Program Settings