Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 7.0e-176 620.5 319 100.0
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 4.1e-91 339.0 332 58.7
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 7.6e-90 334.7 331 59.2
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.0e-89 334.3 331 57.1
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 3.3e-77 292.7 321 52.6
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 4.3e-77 292.4 334 51.2
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 4.8e-76 288.9 328 51.5
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.4e-75 287.3 332 53.3
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.2e-74 284.3 328 50.0
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.7e-73 280.4 331 51.1
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 6.5e-73 278.5 326 50.9
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 8.5e-73 278.1 285 55.1
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.9e-72 276.9 301 52.5
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.5e-72 276.6 328 50.0
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 3.2e-72 276.2 321 50.2
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.2e-71 274.2 304 53.6
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.2e-71 274.2 288 52.4
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 6.1e-71 271.9 328 47.6
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 7.9e-71 271.6 334 49.1
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 7.9e-71 271.6 328 47.6
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 7.9e-71 271.6 328 47.6
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.4e-70 270.8 323 49.8
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 1.4e-70 270.8 329 49.2
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.3e-70 270.0 288 54.5
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 3.0e-70 269.6 285 53.3
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.0e-70 269.6 307 53.4
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 3.0e-70 269.6 334 47.0
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 6.7e-70 268.5 328 48.5
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 8.8e-70 268.1 288 54.2
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.1e-69 267.7 328 47.6
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.6e-69 266.5 335 50.1
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 5.7e-69 265.4 323 48.0
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 7.4e-69 265.0 332 45.8
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 7.4e-69 265.0 324 47.8
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 9.7e-69 264.6 335 48.1
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.7e-69 264.6 331 46.8
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 1.3e-68 264.2 285 54.0
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.7e-68 263.8 330 48.2
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 2.2e-68 263.5 324 47.5
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 8.2e-68 261.5 295 50.8
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.1e-67 261.2 285 51.6
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.8e-67 260.4 285 53.3
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 2.4e-67 260.0 330 46.7
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 2.4e-67 260.0 327 48.6
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 3.1e-67 259.6 322 46.9
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 4.1e-67 259.2 285 50.9
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 7.0e-67 258.5 345 46.1
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 1.2e-66 257.7 301 48.2
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.2e-66 257.7 326 48.2
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 2.0e-66 256.9 334 45.5
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 2.6e-66 256.5 283 52.7
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 1.7e-65 253.8 328 46.0
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.7e-65 253.8 288 50.0
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 5.0e-65 252.3 331 47.4
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 6.5e-65 251.9 327 46.8
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 1.1e-64 251.1 327 47.4
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 4.2e-64 249.2 331 46.2
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 4.2e-64 249.2 289 49.1
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 7.2e-64 248.4 267 50.9
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 9.4e-64 248.1 327 46.2
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 2.1e-63 246.9 264 54.5
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 2.1e-63 246.9 326 44.8
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 2.1e-63 246.9 334 44.0
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 6.1e-63 245.4 263 52.1
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.0e-62 244.6 334 44.0
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 2.3e-62 243.4 300 47.7
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.0e-62 243.0 288 48.6
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 5.2e-62 242.3 263 51.3
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 3.3e-61 239.6 306 45.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 4.4e-61 239.2 293 48.8
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 9.7e-61 238.0 287 48.4
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 9.7e-61 238.0 333 43.5
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 2.2e-60 236.9 285 48.4
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-60 236.9 333 43.5
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 4.8e-60 235.7 288 46.5
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 1.8e-59 233.8 321 44.2
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 2.4e-59 233.4 324 45.4
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 4.1e-59 232.6 319 44.5
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 4.1e-59 232.6 319 44.5
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 7.0e-59 231.9 291 45.4
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 1.6e-58 230.7 288 46.2
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 1.6e-58 230.7 303 45.9
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 2.0e-58 230.3 288 47.6
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 3.5e-58 229.6 294 45.2
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.0e-57 228.0 321 43.3
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.3e-57 227.6 291 47.8
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 6.5e-57 225.3 263 49.0
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 3.2e-56 223.0 281 47.7
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 2.7e-55 219.9 311 44.4
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.1e-55 218.8 313 42.8
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 1.4e-54 217.6 301 44.2
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 4.4e-53 212.6 307 43.0
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.3e-52 211.1 227 51.5
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 8.3e-52 208.4 300 43.0
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 7.0e-51 205.3 285 42.1
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 1.6e-50 204.1 311 42.8
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 7.2e-48 195.3 228 50.9
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.1e-47 193.7 279 43.0
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 3.6e-47 193.0 298 40.9
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 4.0e-46 189.5 255 46.7
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 3.4e-45 186.4 286 42.3
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 9.8e-45 184.9 311 37.9
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.1e-43 179.9 271 40.6
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 2.0e-42 177.2 220 48.2
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.8e-41 172.9 273 39.2
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 2.5e-40 170.2 292 37.7
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 6.1e-39 165.6 210 43.8
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 3.0e-38 163.3 283 37.1
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 2.9e-36 156.8 272 36.4
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 3.7e-36 156.4 221 41.6
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 6.6e-33 145.6 337 33.2
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 2.5e-32 143.7 289 37.0
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 6.2e-31 139.0 274 36.9
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.0e-30 136.3 117 57.3
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 3.4e-29 133.3 150 48.7
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.0e-26 124.0 83 72.3
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 9.5e-24 115.2 172 40.1
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 5.8e-21 105.9 268 32.1
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 7.5e-21 105.5 87 62.1
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.4e-19 100.5 279 32.6
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 4.3e-16 89.7 209 32.5
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 5.2e-14 82.8 100 44.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.2e-12 77.4 61 55.7
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 8.4e-12 75.5 78 44.9
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.9e-11 74.3 61 54.1
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 5.4e-11 72.8 60 55.0
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 2.1e-10 70.9 61 50.8
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 2.1e-10 70.9 101 41.6
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.7e-10 70.5 101 41.6
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.7e-10 70.5 101 41.6
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 6.0e-10 69.3 55 58.2
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.0e-10 69.3 101 41.6
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.3e-09 68.2 101 40.6
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 1.1e-08 65.1 58 55.2
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 1.9e-08 64.3 62 43.5
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 1.1e-06 58.5 57 49.1


User provided reference genes

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