Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 1.4e-153 546.2 264 100.0
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 1.3e-95 353.6 246 69.5
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 2.9e-95 352.4 244 72.5
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 5.2e-92 341.7 233 72.5
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 1.8e-89 333.2 242 63.6
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 1.2e-88 330.5 225 67.1
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 5.0e-87 325.1 221 69.7
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 2.5e-86 322.8 224 67.4
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 3.0e-84 315.8 194 71.6
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 3.0e-84 315.8 228 64.9
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 4.0e-84 315.5 194 73.2
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 5.2e-84 315.1 211 69.2
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 1.5e-83 313.5 195 72.3
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 2.0e-83 313.2 195 72.3
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 2.6e-83 312.8 195 72.3
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 7.5e-83 311.2 208 67.8
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 2.8e-82 309.3 195 70.8
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 6.3e-82 308.1 201 69.2
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 8.3e-82 307.8 210 67.1
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 1.8e-81 306.6 202 67.8
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 2.4e-81 306.2 210 66.7
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 2.4e-81 306.2 210 65.7
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 4.1e-81 305.4 196 70.4
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 9.2e-81 304.3 195 69.7
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 3.5e-80 302.4 195 69.2
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 3.5e-80 302.4 228 62.7
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 7.7e-80 301.2 195 68.7
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 1.1e-78 297.4 179 73.2
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 1.5e-78 297.0 239 59.8
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 4.3e-78 295.4 195 68.2
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.2e-77 293.9 195 67.7
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 2.1e-77 293.1 191 68.6
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 2.8e-77 292.7 219 60.7
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 3.6e-77 292.4 187 70.1
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 1.0e-76 290.8 219 61.2
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 1.0e-76 290.8 201 63.2
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 1.4e-76 290.4 197 67.5
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 1.8e-76 290.0 218 61.0
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 2.3e-76 289.7 242 55.8
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 4.0e-76 288.9 248 56.5
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 4.0e-76 288.9 206 67.0
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 5.2e-76 288.5 187 69.5
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 3.4e-75 285.8 187 69.5
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 2.2e-74 283.1 239 57.7
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 4.9e-74 282.0 227 58.6
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 1.4e-73 280.4 209 62.7
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.8e-73 280.0 263 53.6
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.4e-73 279.6 236 56.8
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 3.2e-73 279.3 179 72.6
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 5.4e-73 278.5 192 63.0
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 5.9e-72 275.0 196 62.8
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 7.8e-72 274.6 184 68.5
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.0e-71 274.2 171 71.9
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 2.3e-71 273.1 179 69.3
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 6.6e-71 271.6 199 60.8
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 1.1e-70 270.8 198 62.6
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 1.9e-70 270.0 198 62.6
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.5e-70 269.6 191 61.8
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 3.3e-70 269.2 197 62.9
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 4.3e-70 268.9 194 63.4
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 4.3e-70 268.9 192 62.5
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 7.3e-70 268.1 202 60.4
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 3.6e-69 265.8 218 57.3
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 4.7e-69 265.4 188 64.9
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 8.0e-69 264.6 180 67.2
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 1.4e-68 263.8 189 64.6
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.0e-68 262.3 194 59.3
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 5.2e-68 261.9 159 76.1
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 8.9e-68 261.2 191 61.3
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 8.9e-68 261.2 194 60.3
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 2.0e-67 260.0 191 59.7
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 2.6e-67 259.6 191 60.7
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 2.6e-67 259.6 233 50.6
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 4.4e-67 258.8 194 59.8
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 4.4e-67 258.8 194 58.8
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 5.8e-67 258.5 239 54.4
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-66 257.3 194 59.3
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-66 257.3 194 59.3
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 2.9e-66 256.1 192 60.9
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 8.3e-66 254.6 186 60.2
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 8.3e-66 254.6 179 64.2
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 8.3e-66 254.6 192 60.4
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 1.1e-65 254.2 194 58.8
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 1.9e-65 253.4 219 54.8
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 4.1e-65 252.3 179 65.4
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 4.1e-65 252.3 179 63.7
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 4.1e-65 252.3 179 63.7
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 4.1e-65 252.3 200 58.0
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 5.4e-65 251.9 213 55.9
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 7.0e-65 251.5 179 63.7
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 7.0e-65 251.5 179 63.7
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 9.2e-65 251.1 179 63.7
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 9.2e-65 251.1 179 63.7
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 9.2e-65 251.1 179 63.7
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 2.0e-64 250.0 179 63.7
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.0e-64 250.0 179 64.8
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.0e-64 250.0 193 57.5
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.7e-64 249.6 179 62.0
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.5e-64 249.2 195 56.9
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 7.8e-64 248.1 179 63.7
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.0e-63 247.7 214 55.1
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.0e-63 247.7 179 63.1
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 3.0e-63 246.1 195 57.9
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 3.9e-63 245.7 192 59.4
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 5.0e-63 245.4 179 63.7
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 1.5e-62 243.8 214 54.2
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 1.5e-62 243.8 179 60.9
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 3.3e-62 242.7 180 61.1
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.3e-62 242.3 182 59.3
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 4.7e-61 238.8 182 61.0
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 8.1e-61 238.0 179 59.8
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 4.4e-59 232.3 198 57.6
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 5.8e-59 231.9 202 53.5
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-58 230.7 188 57.4
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 1.4e-57 227.3 180 59.4
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 1.9e-57 226.9 156 64.1
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-55 220.7 176 56.2
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 1.3e-55 220.7 176 56.2
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-55 220.7 176 56.2
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 6.6e-55 218.4 188 56.9
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 2.5e-54 216.5 180 55.0
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 2.5e-54 216.5 180 55.0
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 3.3e-54 216.1 215 47.0
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 4.3e-54 215.7 176 58.0
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 4.7e-53 212.2 180 53.3
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.4e-52 210.7 151 68.2
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 1.8e-52 210.3 137 70.8
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 2.3e-52 209.9 189 53.4
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 3.1e-52 209.5 179 55.3
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 3.1e-52 209.5 207 49.3
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 8.9e-52 208.0 165 57.6
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-50 204.1 163 58.9
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 1.4e-49 200.7 144 59.0
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 3.2e-49 199.5 166 59.6
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 9.2e-49 198.0 140 67.1
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 1.6e-48 197.2 194 49.5
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 1.5e-46 190.7 242 42.6
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 1.2e-43 181.0 111 73.0
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 1.1e-41 174.5 119 64.7
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 1.7e-34 150.6 219 37.9
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 7.1e-33 145.2 191 41.9
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 1.3e-31 141.0 191 41.9
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-31 141.0 191 41.9
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 5.1e-31 139.0 179 42.5
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.1e-30 137.9 117 54.7
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 2.1e-29 133.7 88 65.9
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 2.8e-29 133.3 199 41.2
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 6.2e-29 132.1 114 51.8
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 2.6e-27 126.7 85 67.1
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 4.9e-26 122.5 96 59.4
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 2.1e-24 117.1 152 49.3
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 2.7e-24 116.7 174 39.7
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.3e-23 114.4 89 57.3
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 1.9e-22 110.5 86 59.3
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.1e-21 107.1 83 54.2
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 3.7e-21 106.3 208 33.7
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 3.4e-19 99.8 74 60.8
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 1.4e-17 94.4 62 61.3
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 5.5e-17 92.4 73 58.9
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 2.7e-16 90.1 66 65.2
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.6e-13 80.9 59 54.2
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.6e-11 73.6 61 55.7
Cfa025661 Carpinus fangiana HOM05D004249 ORTHO05D005015 1.9e-09 67.4 147 32.0
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 5.5e-09 65.9 137 32.8
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 5.5e-09 65.9 137 32.8
BraA03t09486Z Brassica rapa HOM05D004249 ORTHO05D005015 1.0e-07 61.6 45 55.6
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 2.3e-07 60.5 41 63.4


User provided reference genes

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