Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14932 Striga asiatica HOM05D013340 ORTHO05D013369 1.2e-157 559.7 269 100.0
SGA_v2.0_scaffold90G27816 Striga asiatica HOM05D013340 ORTHO05D013369 2.1e-16 90.5 161 41.6
SGA_v2.0_scaffold37G14891 Striga asiatica HOM05D013340 ORTHO05D399171 6.2e-16 89.0 63 66.7
SGA_v2.0_scaffold291G47350 Striga asiatica HOM05D017473 ORTHO05D402525 5.8e-14 82.4 64 64.1
SGA_v2.0_scaffold73G24455 Striga asiatica HOM05D017473 ORTHO05D402887 6.4e-13 79.0 74 54.1
Phvul.003G005600 Phaseolus vulgaris HOM05D013340 ORTHO05D013369 3.2e-12 76.6 100 45.0
RcHm_v2.0_Chr7g0200261 Rosa chinensis HOM05D013340 ORTHO05D013369 1.1e-09 68.2 121 38.8
SGA_v2.0_scaffold37G14918 Striga asiatica HOM05D000144 ORTHO05D405739 1.5e-09 67.8 38 84.2
Os08g0547951 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D013369 3.6e-08 63.2 97 42.3
SGA_v2.0_scaffold34G13612 Striga asiatica HOM05D020718 ORTHO05D013369 4.7e-08 62.8 82 46.3
MBI16_g21173_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 5.8e-06 55.8 107 37.4
Os01g0543800 Oryza sativa ssp. japonica HOM05D013340 ORTHO05D013369 5.8e-06 55.8 82 43.9
Os09g0264675 Oryza sativa ssp. japonica HOM05D020718 ORTHO05D013369 7.5e-06 55.5 87 41.4


User provided reference genes

Program Settings